RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 TOR1AIP1Q5JTV8 583 aa17.91■□□□□ 0.46
PTCD3-210ENST00000473829 COLEC12Q5KU26 742 aa17.91■□□□□ 0.46
PTCD3-210ENST00000473829 FAAH2Q6GMR7 532 aa17.91■□□□□ 0.46
PTCD3-210ENST00000473829 OR11G2Q8NGC1 345 aa17.91■□□□□ 0.46
PTCD3-210ENST00000473829 OR51Q1Q8NH59 317 aa17.91■□□□□ 0.46
PTCD3-210ENST00000473829 MZB1Q8WU39 189 aa17.91■□□□□ 0.46
PTCD3-210ENST00000473829 NACC2Q96BF6 587 aa17.91■□□□□ 0.46
PTCD3-210ENST00000473829 SMIM10Q96HG1 83 aa17.91■□□□□ 0.46
PTCD3-210ENST00000473829 FER1L6-AS2Q96M78 137 aa17.91■□□□□ 0.46
PTCD3-210ENST00000473829 SLC25A23Q9BV35 468 aa17.91■□□□□ 0.46
PTCD3-210ENST00000473829 RBCK1Q9BYM8 510 aa17.91■□□□□ 0.46
PTCD3-210ENST00000473829 NT5DC2Q9H857 520 aa17.91■□□□□ 0.46
PTCD3-210ENST00000473829 FETUBQ9UGM5 382 aa17.91■□□□□ 0.46
PTCD3-210ENST00000473829 PCDHGA9Q9Y5G4 932 aaKnown RBP17.91■□□□□ 0.46
PTCD3-210ENST00000473829 OR2W5A6NFC9 320 aa17.9■□□□□ 0.46
PTCD3-210ENST00000473829 WFS1O76024 890 aa17.9■□□□□ 0.46
PTCD3-210ENST00000473829 IGHEP01854 428 aa17.9■□□□□ 0.46
PTCD3-210ENST00000473829 SERPINA6P08185 405 aa17.9■□□□□ 0.46
PTCD3-210ENST00000473829 SBK3P0C264 359 aa17.9■□□□□ 0.46
PTCD3-210ENST00000473829 COL6A2P12110 1019 aa17.9■□□□□ 0.46
PTCD3-210ENST00000473829 CXCR2P25025 360 aa17.9■□□□□ 0.46
PTCD3-210ENST00000473829 XCR1P46094 333 aa17.9■□□□□ 0.46
PTCD3-210ENST00000473829 EMP2P54851 167 aa17.9■□□□□ 0.46
PTCD3-210ENST00000473829 ALDH18A1P54886 795 aaKnown RBP17.9■□□□□ 0.46
PTCD3-210ENST00000473829 IRF8Q02556 426 aa17.9■□□□□ 0.46
PTCD3-210ENST00000473829 TSNAXIP1Q2TAA8 658 aa17.9■□□□□ 0.46
PTCD3-210ENST00000473829 TIFABQ6ZNK6 161 aa17.9■□□□□ 0.46
PTCD3-210ENST00000473829 KRT78Q8N1N4 520 aa17.9■□□□□ 0.46
PTCD3-210ENST00000473829 TEX9Q8N6V9 391 aa17.9■□□□□ 0.46
PTCD3-210ENST00000473829 UBLCP1Q8WVY7 318 aaPredicted RBP17.9■□□□□ 0.46
PTCD3-210ENST00000473829 SCYL1Q96KG9 808 aa17.9■□□□□ 0.46
PTCD3-210ENST00000473829 EFCAB11Q9BUY7 163 aa17.9■□□□□ 0.46
PTCD3-210ENST00000473829 PSMC3IPQ9P2W1 217 aaPredicted RBP17.9■□□□□ 0.46
PTCD3-210ENST00000473829 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.9■□□□□ 0.46
PTCD3-210ENST00000473829 MKL2Q9ULH7 1088 aa17.9■□□□□ 0.46
PTCD3-210ENST00000473829 V9GYY5 206 aaPredicted RBP17.9■□□□□ 0.46
PTCD3-210ENST00000473829 DOCK10Q96BY6 2186 aa17.9■□□□□ 0.46
PTCD3-210ENST00000473829 SCN2AQ99250 2005 aa17.89■□□□□ 0.46
PTCD3-210ENST00000473829 SLU7O95391 586 aaKnown RBP17.89■□□□□ 0.45
PTCD3-210ENST00000473829 HEXBP07686 556 aa17.89■□□□□ 0.45
PTCD3-210ENST00000473829 CASP2P42575 452 aa17.89■□□□□ 0.45
PTCD3-210ENST00000473829 PCBP2Q15366 365 aaKnown RBP eCLIP17.89■□□□□ 0.45
PTCD3-210ENST00000473829 TBCCQ15814 346 aa17.89■□□□□ 0.45
PTCD3-210ENST00000473829 TUBB8Q3ZCM7 444 aa17.89■□□□□ 0.45
PTCD3-210ENST00000473829 ASB18Q6ZVZ8 466 aa17.89■□□□□ 0.45
PTCD3-210ENST00000473829 ABHD13Q7L211 337 aa17.89■□□□□ 0.45
PTCD3-210ENST00000473829 GALNT16Q8N428 558 aa17.89■□□□□ 0.45
PTCD3-210ENST00000473829 TMEM151AQ8N4L1 468 aa17.89■□□□□ 0.45
PTCD3-210ENST00000473829 AMER2Q8N7J2 671 aa17.89■□□□□ 0.45
PTCD3-210ENST00000473829 PTGR2Q8N8N7 351 aaPredicted RBP17.89■□□□□ 0.45
PTCD3-210ENST00000473829 CLEC1AQ8NC01 280 aa17.89■□□□□ 0.45
PTCD3-210ENST00000473829 TTLQ8NG68 377 aa17.89■□□□□ 0.45
PTCD3-210ENST00000473829 CCT6BQ92526 530 aa17.89■□□□□ 0.45
PTCD3-210ENST00000473829 MTBPQ96DY7 904 aa17.89■□□□□ 0.45
PTCD3-210ENST00000473829 PEX11GQ96HA9 241 aa17.89■□□□□ 0.45
PTCD3-210ENST00000473829 PITHD1Q9GZP4 211 aaPredicted RBP17.89■□□□□ 0.45
PTCD3-210ENST00000473829 VN1R1Q9GZP7 353 aa17.89■□□□□ 0.45
PTCD3-210ENST00000473829 TBK1Q9UHD2 729 aa17.89■□□□□ 0.45
PTCD3-210ENST00000473829 A0A0G2JN53 185 aa17.88■□□□□ 0.45
PTCD3-210ENST00000473829 FOXO6A8MYZ6 492 aa17.88■□□□□ 0.45
PTCD3-210ENST00000473829 E2F3O00716 465 aa17.88■□□□□ 0.45
PTCD3-210ENST00000473829 RBP1P09455 135 aa17.88■□□□□ 0.45
PTCD3-210ENST00000473829 COX6A1P12074 109 aa17.88■□□□□ 0.45
PTCD3-210ENST00000473829 ACPPP15309 386 aa17.88■□□□□ 0.45
PTCD3-210ENST00000473829 EPB42P16452 691 aa17.88■□□□□ 0.45
PTCD3-210ENST00000473829 PGDP52209 483 aa17.88■□□□□ 0.45
PTCD3-210ENST00000473829 EEF1A2Q05639 463 aaKnown RBP17.88■□□□□ 0.45
PTCD3-210ENST00000473829 PCDH1Q08174 1060 aa17.88■□□□□ 0.45
PTCD3-210ENST00000473829 Q0VFX4 171 aa17.88■□□□□ 0.45
PTCD3-210ENST00000473829 LGSNQ5TDP6 509 aa17.88■□□□□ 0.45
PTCD3-210ENST00000473829 LANCL3Q6ZV70 420 aa17.88■□□□□ 0.45
PTCD3-210ENST00000473829 GOLGA7Q7Z5G4 137 aa17.88■□□□□ 0.45
PTCD3-210ENST00000473829 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.88■□□□□ 0.45
PTCD3-210ENST00000473829 MS4A6EQ96DS6 147 aa17.88■□□□□ 0.45
PTCD3-210ENST00000473829 PHF21BQ96EK2 531 aa17.88■□□□□ 0.45
PTCD3-210ENST00000473829 RHBGQ9H310 441 aa17.88■□□□□ 0.45
PTCD3-210ENST00000473829 LANCL2Q9NS86 450 aa17.88■□□□□ 0.45
PTCD3-210ENST00000473829 GPR83Q9NYM4 423 aa17.88■□□□□ 0.45
PTCD3-210ENST00000473829 IQANK1A0A1B0GTG1 560 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 A0A1W2PQ72 361 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 LRIT2A6NDA9 550 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 ANKDD1BA6NHY2 528 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 GOLGA8RI6L899 631 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 CHST10O43529 356 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 CLEC3AO75596 197 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 CDC123O75794 336 aaPredicted RBP17.87■□□□□ 0.45
PTCD3-210ENST00000473829 GSTM2P28161 218 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 EEF1DP29692 281 aaKnown RBP17.87■□□□□ 0.45
PTCD3-210ENST00000473829 SLCO1A2P46721 670 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 AIMP2Q13155 320 aaKnown RBP17.87■□□□□ 0.45
PTCD3-210ENST00000473829 LAPTM5Q13571 262 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 GTF2H2Q13888 395 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 ADPRMQ3LIE5 342 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 MINDY4Q4G0A6 757 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 PAGE2BQ5JRK9 111 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 MFSD4BQ5TF39 518 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 GTF2H2CQ6P1K8 395 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 TMEM205Q6UW68 189 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 GAL3ST3Q96A11 431 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 SEC16BQ96JE7 1060 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms