RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 SPRP35270 261 aaPredicted RBP4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 TGFBR2P37173 567 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 LIG4P49917 911 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 CXCR4P61073 352 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 NOMO3P69849 1222 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 CD47Q08722 323 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 NOMO1Q15155 1222 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 STXBP2Q15833 593 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 CALCRLQ16602 461 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 MICBQ29980 383 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 C2CD6Q53TS8 623 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 BICRALQ6AI39 1079 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 GLYATQ6IB77 296 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 RASSF6Q6ZTQ3 369 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 PIGZQ86VD9 579 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 C12orf45Q8N5I9 185 aaPredicted RBP4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 LRRC17Q8N6Y2 441 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 CDYL2Q8N8U2 506 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 TTC29Q8NA56 475 aaPredicted RBP4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 MARCH10Q8NA82 808 aaPredicted RBP4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 SLC35B2Q8TB61 432 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 SLC22A18Q96BI1 424 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 ROPN1LQ96C74 230 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 RNF31Q96EP0 1072 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 ZC3HAV1LQ96H79 300 aaKnown RBP4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 ZC3H10Q96K80 434 aaKnown RBP4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 LURAP1Q96LR2 239 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 TRIM62Q9BVG3 475 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 MMP28Q9H239 520 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 DUSP21Q9H596 190 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 ANKEF1Q9NU02 776 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 RAB20Q9NX57 234 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 PNMA8BQ9ULN7 279 aaPredicted RBP4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 SIT1Q9Y3P8 196 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 AKAP11Q9UKA4 1901 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 WASHC1A8K0Z3 465 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 KCNK1O00180 336 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 DSCR3O14972 297 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 SELENOFO60613 162 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 POP7O75817 140 aaKnown RBP4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 LALBAP00709 142 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 PF4V1P10720 104 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 C4BPBP20851 252 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 ADORA1P30542 326 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 CA5AP35218 305 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 GLUD2P49448 558 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 MEP1AQ16819 746 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 TATDN3Q17R31 274 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 HFEQ30201 348 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 ZNF528Q3MIS6 628 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 FBXO48Q5FWF7 155 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 TPGS2Q68CL5 300 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 REP15Q6BDI9 236 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 CASC4Q6P4E1 433 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 PLET1Q6UQ28 207 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 RTL4Q6ZR62 310 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 ZC3HC1Q86WB0 502 aaKnown RBP4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 TRIM48Q8IWZ4 208 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 LNX2Q8N448 690 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 PCSK9Q8NBP7 692 aaKnown RBP4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 MTERF3Q96E29 417 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 TRMT61AQ96FX7 289 aaKnown RBP4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 FAM84AQ96KN4 292 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 NEU1Q99519 415 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 C19orf43Q9BQ61 176 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 TBCDQ9BTW9 1192 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 SLC25A23Q9BV35 468 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 ZNF436Q9C0F3 470 aaPredicted RBP4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 DNTTIP1Q9H147 329 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 SMOC2Q9H3U7 446 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 ANKRD19PQ9H560 264 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 FAM118AQ9NWS6 357 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 SCN3BQ9NY72 215 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 NDUFAF4Q9P032 175 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 PHF11Q9UIL8 331 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 DUSP12Q9UNI6 340 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 CRYL1Q9Y2S2 319 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 TCRBV5S2A0A599 114 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 FAM159BA6NKW6 160 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 KCNU1A8MYU2 1149 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 WWP2O00308 870 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 SLC28A1O00337 649 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 VEGFDO43915 354 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 SNAPC5O75971 98 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 AMHP03971 560 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 KLK3P07288 261 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 SAGP10523 405 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 TMEM11P17152 192 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 GJA1P17302 382 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 SPINK2P20155 84 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ATP5F1P24539 256 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 GDNFP39905 211 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 RFC3P40938 356 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 SLC1A3P43003 542 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 RPL14P50914 215 aaKnown RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 CDH4P55283 916 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 CDH13P55290 713 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 FMO1Q01740 532 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 SLC3A1Q07837 685 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 TIGD6Q17RP2 521 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms