RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 SLC18A2Q05940 514 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 CHIT1Q13231 466 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 FAM53BQ14153 422 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 RBBP5Q15291 538 aaKnown RBP12.44□□□□□ -0.42
TPM3-216ENST00000473036 TBCCQ15814 346 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 NKG7Q16617 165 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 MUM1Q2TAK8 710 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 VWA2Q5GFL6 755 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 XKR6Q5GH73 641 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 GARNL3Q5VVW2 1013 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 SHISA6Q6ZSJ9 500 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 GOLGA7Q7Z5G4 137 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 MTERF4Q7Z6M4 381 aaKnown RBP12.44□□□□□ -0.42
TPM3-216ENST00000473036 LAPTM4BQ86VI4 370 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 C4orf33Q8N1A6 199 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 RNF175Q8N4F7 328 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 TEX9Q8N6V9 391 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 NT5CQ8TCD5 201 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 AIF1LQ9BQI0 150 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 SLC6A16Q9GZN6 736 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 IQCGQ9H095 443 aaKnown RBP12.44□□□□□ -0.42
TPM3-216ENST00000473036 MRPL46Q9H2W6 279 aaKnown RBP12.44□□□□□ -0.42
TPM3-216ENST00000473036 EHD1Q9H4M9 534 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 IFT80Q9P2H3 777 aaPredicted RBP12.44□□□□□ -0.42
TPM3-216ENST00000473036 OPTCQ9UBM4 332 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 ANAPC2Q9UJX6 822 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 KCND3Q9UK17 655 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 PCTPQ9UKL6 214 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 RELNP78509 3460 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 USP9YO00507 2555 aaPredicted RBP12.44□□□□□ -0.42
TPM3-216ENST00000473036 PRRC2CQ9Y520 2896 aaKnown RBP12.44□□□□□ -0.42
TPM3-216ENST00000473036 NUP210LQ5VU65 1888 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 IGLV3-12A0A075B6K2 115 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 CLEC18AA5D8T8 446 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 G3V2L1 256 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 SGK494L7N484 410 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 MASP2O00187 686 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 RPS17P08708 135 aaKnown RBP12.43□□□□□ -0.42
TPM3-216ENST00000473036 IL1RNP18510 177 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 HNRNPH1P31943 449 aaKnown RBP12.43□□□□□ -0.42
TPM3-216ENST00000473036 GRK3P35626 688 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 SLC18A1P54219 525 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 RPS15P62841 145 aaKnown RBP12.43□□□□□ -0.42
TPM3-216ENST00000473036 PWP1Q13610 501 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 GTF2H2Q13888 395 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 UGT8Q16880 541 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 CRTC2Q53ET0 693 aaPredicted RBP12.43□□□□□ -0.42
TPM3-216ENST00000473036 UNC50Q53HI1 259 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 GTF2H2CQ6P1K8 395 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 BORAQ6PGQ7 559 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 CLEC18BQ6UXF7 455 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 TMIGD1Q6UXZ0 262 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 SYVN1Q86TM6 617 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 TRABD2AQ86V40 505 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 CAMKVQ8NCB2 501 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 CLEC18CQ8NCF0 446 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 OR52B6Q8NGF0 335 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 OR5T3Q8NGG3 340 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 UTP15Q8TED0 518 aaKnown RBP12.43□□□□□ -0.42
TPM3-216ENST00000473036 MMABQ96EY8 250 aaPredicted RBP12.43□□□□□ -0.42
TPM3-216ENST00000473036 ATP6V1G3Q96LB4 118 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 CATSPER2Q96P56 530 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 CDK15Q96Q40 435 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 EFHD1Q9BUP0 239 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 DRC3Q9H069 523 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 SLC26A1Q9H2B4 701 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 RHBGQ9H310 441 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 SOX17Q9H6I2 414 aaPredicted RBP12.43□□□□□ -0.42
TPM3-216ENST00000473036 NT5DC2Q9H857 520 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 ZNF304Q9HCX3 659 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 ZNF225Q9UK10 706 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 GRID1Q9ULK0 1009 aa12.43□□□□□ -0.42
TPM3-216ENST00000473036 PTRH2Q9Y3E5 179 aaKnown RBP12.43□□□□□ -0.42
TPM3-216ENST00000473036 DOPEY2Q9Y3R5 2298 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 DOCK10Q96BY6 2186 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 CDC14CA4D256 554 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 OR2W5A6NFC9 320 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 ZNF860A6NHJ4 632 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 STX16-NPEPL1H3BU86 382 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 AGPSO00116 658 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 STX16O14662 325 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 CLGNO14967 610 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 JRKO75564 520 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 NSA2O95478 260 aaKnown RBP12.42□□□□□ -0.42
TPM3-216ENST00000473036 RECKO95980 971 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 PROCP04070 461 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 SERPIND1P05546 499 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 ZNF888P0CJ79 500 aaPredicted RBP12.42□□□□□ -0.42
TPM3-216ENST00000473036 KRT4P19013 534 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 TSPAN8P19075 237 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 CRHR1P34998 444 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 HNF4AP41235 474 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 CDH13P55290 713 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 IRF8Q02556 426 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 DSG2Q14126 1118 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 DEFB109BQ30KR1 87 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 TNFAIP8L3Q5GJ75 292 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 CPZQ66K79 652 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 PRMT9Q6P2P2 845 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 PPP1R32Q7Z5V6 425 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms