RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 CD200R1Q8TD46 325 aa9.46□□□□□ -0.9
SCAMP3-205ENST00000472397 PEX13Q92968 403 aa9.46□□□□□ -0.9
SCAMP3-205ENST00000472397 TSNARE1Q96NA8 513 aa9.46□□□□□ -0.9
SCAMP3-205ENST00000472397 EBNA1BP2Q99848 306 aaKnown RBP9.46□□□□□ -0.9
SCAMP3-205ENST00000472397 CCDC68Q9H2F9 335 aa9.46□□□□□ -0.9
SCAMP3-205ENST00000472397 LIME1Q9H400 295 aa9.46□□□□□ -0.9
SCAMP3-205ENST00000472397 KLHL31Q9H511 634 aa9.46□□□□□ -0.9
SCAMP3-205ENST00000472397 EIF2B3Q9NR50 452 aaKnown RBP9.46□□□□□ -0.9
SCAMP3-205ENST00000472397 COQ3Q9NZJ6 369 aa9.46□□□□□ -0.9
SCAMP3-205ENST00000472397 FBXW2Q9UKT8 454 aa9.46□□□□□ -0.9
SCAMP3-205ENST00000472397 PDE10AQ9Y233 779 aa9.46□□□□□ -0.9
SCAMP3-205ENST00000472397 RNF6Q9Y252 685 aa9.46□□□□□ -0.9
SCAMP3-205ENST00000472397 DHRS7Q9Y394 339 aa9.46□□□□□ -0.9
SCAMP3-205ENST00000472397 MAD1L1Q9Y6D9 718 aa9.46□□□□□ -0.9
SCAMP3-205ENST00000472397 GTF3C1Q12789 2109 aa9.46□□□□□ -0.9
SCAMP3-205ENST00000472397 TRBV11-1A0A0K0K1C0 115 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 MAGEB17A8MXT2 336 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 GFYI3L273 518 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 PFDN6O15212 129 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 PEX1O43933 1283 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 CEP104O60308 925 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 GUCA1CO95843 209 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 FHP07954 510 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 OGNP20774 298 aaKnown RBP9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 HSD17B2P37059 387 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 CYB561P49447 251 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 NUP107P57740 925 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 MLF1P58340 268 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 PMPCAQ10713 525 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 MYBPHQ13203 477 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 CCNG2Q16589 344 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 PHKG1Q16816 387 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 RBM20Q5T481 1227 aaKnown RBP9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 TTC27Q6P3X3 843 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 PLPP5Q8NEB5 264 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 ELP5Q8TE02 316 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 TBC1D20Q96BZ9 403 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 TM4SF19Q96DZ7 209 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 C14orf79Q96F83 325 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 TCF12Q99081 682 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 SPOCK3Q9BQ16 436 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 DEFB126Q9BYW3 111 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 ENKD1Q9H0I2 346 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 GSX1Q9H4S2 264 aaPredicted RBP9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 PNO1Q9NRX1 252 aaKnown RBP9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 KCMF1Q9P0J7 381 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 SAMD15Q9P1V8 674 aa9.45□□□□□ -0.9
SCAMP3-205ENST00000472397 C4orf51C9J302 202 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 NPIPA2E9PIF3 369 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 E9PLN8 166 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 NPIPA3F8WFD2 350 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 PRKNO60260 465 aaPredicted RBP9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 GALR3O60755 368 aaPredicted RBP9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 MYO1DO94832 1006 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 MLYCDO95822 493 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 KRT14P02533 472 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 NPPBP16860 134 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 PAMP19021 973 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 TFEBP19484 476 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 TPSB2P20231 275 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 AGAP20933 346 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 SKIV2L2P42285 1042 aaKnown RBP9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 CDKN2DP55273 166 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 TIAL1Q01085 375 aaKnown RBP eCLIP9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 PLGLB1Q02325 96 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 RBBP5Q15291 538 aaKnown RBP9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 TPSAB1Q15661 275 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 HSP90AA5PQ58FG0 334 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 CMPK2Q5EBM0 449 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 TOR1AIP1Q5JTV8 583 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 HP1BP3Q5SSJ5 553 aaPredicted RBP9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 ZNF585AQ6P3V2 769 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 PAQR3Q6TCH7 311 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 CLNKQ7Z7G1 428 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 HORMAD2Q8N7B1 307 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 OR10Q1Q8NGQ4 319 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 FAM57AQ8TBR7 257 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 DOK4Q8TEW6 326 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 TMEM125Q96AQ2 219 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 LINGO1Q96FE5 620 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 POM121Q96HA1 1249 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 OR4K3Q96R72 315 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 VKORC1Q9BQB6 163 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 ZNF559Q9BR84 538 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 AARSD1Q9BTE6 412 aaKnown RBP9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 FRMD8P1Q9BZ68 369 aaPredicted RBP9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 TSGA10Q9BZW7 698 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 LZTFL1Q9NQ48 299 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 PNPLA3Q9NST1 481 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 INTS10Q9NVR2 710 aaKnown RBP9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 TRMT6Q9UJA5 497 aaKnown RBP9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 FBXO5Q9UKT4 447 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 IKZF3Q9UKT9 509 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 LIPGQ9Y5X9 500 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 MTORP42345 2549 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 ITPR3Q14573 2671 aa9.44□□□□□ -0.9
SCAMP3-205ENST00000472397 KCNE1BA0A087WTH5 132 aa9.43□□□□□ -0.9
SCAMP3-205ENST00000472397 ZCWPW2A0A1B0GU75 182 aa9.43□□□□□ -0.9
SCAMP3-205ENST00000472397 USP27XA6NNY8 438 aa9.43□□□□□ -0.9
SCAMP3-205ENST00000472397 NRDCO43847 1150 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms