RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, human

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR4-208	ENST00000471880	ARL1	P40616	181 aa	Predicted RBP	14	□□□□□ -0.17
SSR4-208	ENST00000471880	IRF8	Q02556	426 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	AGAP7P	Q5VUJ5	663 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	ATG9B	Q674R7	924 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	JMJD6	Q6NYC1	403 aa	Predicted RBP	14	□□□□□ -0.17
SSR4-208	ENST00000471880	TMIGD1	Q6UXZ0	262 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	SLCO4C1	Q6ZQN7	724 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	LANCL3	Q6ZV70	420 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	KBTBD2	Q8IY47	623 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	SHISA5	Q8N114	240 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	ZADH2	Q8N4Q0	377 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	NT5C	Q8TCD5	201 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	AGAP4	Q96P64	663 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	PAFAH2	Q99487	392 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	SMAD5	Q99717	465 aa	Known RBP	14	□□□□□ -0.17
SSR4-208	ENST00000471880	TGIF2	Q9GZN2	237 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	VN1R1	Q9GZP7	353 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	CLMP	Q9H6B4	373 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	EPS8L2	Q9H6S3	715 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	ZNF552	Q9H707	407 aa	Predicted RBP	14	□□□□□ -0.17
SSR4-208	ENST00000471880	MLXIPL	Q9NP71	852 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	IGSF5	Q9NSI5	407 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	CPSF2	Q9P2I0	782 aa	Known RBP	14	□□□□□ -0.17
SSR4-208	ENST00000471880	OPTC	Q9UBM4	332 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	C19orf25	Q9UFG5	118 aa	Predicted RBP	14	□□□□□ -0.17
SSR4-208	ENST00000471880	PLAA	Q9Y263	795 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	SLC22A7	Q9Y694	548 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	PTPN13	Q12923	2485 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	EXOC1L	A0A1B0GW35	172 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	SYCE1L	A8MT33	242 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	GALR3	O60755	368 aa	Predicted RBP	13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	B4GALT2	O60909	372 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	KERA	O60938	352 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	KRT38	O76015	456 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	WFS1	O76024	890 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	SEC24D	O94855	1032 aa	Predicted RBP	13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	PCNA	P12004	261 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	COX6A1	P12074	109 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	AGTR2	P50052	363 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	CSRP3	P50461	194 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	STXBP1	P61764	594 aa	Known RBP	13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	ACTN3	Q08043	901 aa	Predicted RBP	13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	DOC2A	Q14183	400 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	HIST2H2AC	Q16777	129 aa	Predicted RBP	13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	SLC6A19	Q695T7	634 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	HIST2H2AA3	Q6FI13	130 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	NDUFAF7	Q7L592	441 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	ISCA2	Q86U28	154 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	ATCAY	Q86WG3	371 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	SIRT6	Q8N6T7	355 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	PDPR	Q8NCN5	879 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	TTL	Q8NG68	377 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	UTP15	Q8TED0	518 aa	Known RBP	13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	CD244	Q9BZW8	370 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	KLHL31	Q9H511	634 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	ZBTB20	Q9HC78	741 aa	Predicted RBP	13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	RIC8B	Q9NVN3	520 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	GPRC5B	Q9NZH0	403 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	C5AR2	Q9P296	337 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	PTGFRN	Q9P2B2	879 aa		13.99	□□□□□ -0.17
SSR4-208	ENST00000471880	IGHV1-45	A0A0A0MS14	117 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	ERI3	O43414	337 aa	Known RBP	13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	CHST10	O43529	356 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	SH3BGRL	O75368	114 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	CELA2A	P08217	269 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	ECHS1	P30084	290 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	KCNC1	P48547	511 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	CD97	P48960	835 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	SERPINB9	P50453	376 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	BTN3A2	P78410	334 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880		Q0VFX4	171 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	CHIT1	Q13231	466 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	PFKFB4	Q16877	469 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	PAGE2B	Q5JRK9	111 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	CDKL4	Q5MAI5	379 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	TEX35	Q5T0J7	233 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	LRRC70	Q7Z2Q7	622 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	CCDC91	Q7Z6B0	441 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	HPS6	Q86YV9	775 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	RELL1	Q8IUW5	271 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	GSPT2	Q8IYD1	628 aa	Known RBP	13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	CENPL	Q8N0S6	344 aa	Predicted RBP	13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	CYP4X1	Q8N118	509 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	TEX9	Q8N6V9	391 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	RBMXL3	Q8N7X1	1067 aa	Known RBP	13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	CPT1C	Q8TCG5	803 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	SLC44A1	Q8WWI5	657 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	PTCD3	Q96EY7	689 aa	Known RBP	13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	ATOH8	Q96SQ7	321 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	SARG	Q9BW04	601 aa		13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	COPS7B	Q9H9Q2	264 aa	Predicted RBP	13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	ASH1L	Q9NR48	2969 aa	Known RBP	13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	PTBP2	Q9UKA9	531 aa	Known RBP	13.98	□□□□□ -0.17
SSR4-208	ENST00000471880	RELN	P78509	3460 aa		13.97	□□□□□ -0.17
SSR4-208	ENST00000471880	TRIM49D1	C9J1S8	452 aa		13.97	□□□□□ -0.17
SSR4-208	ENST00000471880		K7EPI3	171 aa		13.97	□□□□□ -0.17
SSR4-208	ENST00000471880	VPS4B	O75351	444 aa		13.97	□□□□□ -0.17
SSR4-208	ENST00000471880	KLHL2	O95198	593 aa		13.97	□□□□□ -0.17
SSR4-208	ENST00000471880	ALDOA	P04075	364 aa	Known RBP	13.97	□□□□□ -0.17
SSR4-208	ENST00000471880	FH	P07954	510 aa		13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms