RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 IP6K3Q96PC2 410 aa14.35□□□□□ -0.11
SNX13-205ENST00000471744 TMEM237Q96Q45 408 aa14.35□□□□□ -0.11
SNX13-205ENST00000471744 CENPHQ9H3R5 247 aa14.35□□□□□ -0.11
SNX13-205ENST00000471744 PRM3Q9NNZ6 103 aa14.35□□□□□ -0.11
SNX13-205ENST00000471744 SSU72Q9NP77 194 aaKnown RBP14.35□□□□□ -0.11
SNX13-205ENST00000471744 MKKSQ9NPJ1 570 aaPredicted RBP14.35□□□□□ -0.11
SNX13-205ENST00000471744 SEMA4BQ9NPR2 832 aaPredicted RBP14.35□□□□□ -0.11
SNX13-205ENST00000471744 SLC22A11Q9NSA0 550 aa14.35□□□□□ -0.11
SNX13-205ENST00000471744 C14orf105Q9NVL8 296 aa14.35□□□□□ -0.11
SNX13-205ENST00000471744 ZNF490Q9ULM2 529 aaPredicted RBP14.35□□□□□ -0.11
SNX13-205ENST00000471744 MAU2Q9Y6X3 613 aa14.35□□□□□ -0.11
SNX13-205ENST00000471744 IGLV3-12A0A075B6K2 115 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 G3V2L1 256 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 H3BQF6 201 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 OR7A17O14581 309 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 IL1RNP18510 177 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 WT1P19544 449 aaPredicted RBP14.34□□□□□ -0.11
SNX13-205ENST00000471744 IL10P22301 178 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 CDC20Q12834 499 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 TRAF3Q13114 568 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 SSPNQ14714 243 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 CASP8Q14790 479 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 SLC9A5Q14940 896 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 RBBP7Q16576 425 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 UGT8Q16880 541 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 ADPRMQ3LIE5 342 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 UNC50Q53HI1 259 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 TNFAIP8L3Q5GJ75 292 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 TOR1AIP1Q5JTV8 583 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 C19orf48Q6RUI8 117 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 COX15Q7KZN9 410 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 MILR1Q7Z6M3 343 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 RAB43Q86YS6 212 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 METTL27Q8N6F8 245 aaPredicted RBP14.34□□□□□ -0.11
SNX13-205ENST00000471744 OR7G3Q8NG95 312 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 OR9A4Q8NGU2 314 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 UTP15Q8TED0 518 aaKnown RBP14.34□□□□□ -0.11
SNX13-205ENST00000471744 ZNF473Q8WTR7 871 aaKnown RBP14.34□□□□□ -0.11
SNX13-205ENST00000471744 SREK1Q8WXA9 508 aaKnown RBP14.34□□□□□ -0.11
SNX13-205ENST00000471744 NACC2Q96BF6 587 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 MOCOSQ96EN8 888 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 NSUN5Q96P11 429 aaKnown RBP14.34□□□□□ -0.11
SNX13-205ENST00000471744 MACROD1Q9BQ69 325 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 CENPKQ9BS16 269 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 ZBTB26Q9HCK0 441 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 OXSMQ9NWU1 459 aa14.34□□□□□ -0.11
SNX13-205ENST00000471744 MRPS2Q9Y399 296 aaKnown RBP14.34□□□□□ -0.11
SNX13-205ENST00000471744 PTRH2Q9Y3E5 179 aaKnown RBP14.34□□□□□ -0.11
SNX13-205ENST00000471744 MRPS18BQ9Y676 258 aaKnown RBP14.34□□□□□ -0.11
SNX13-205ENST00000471744 CELSR3Q9NYQ7 3312 aa14.33□□□□□ -0.11
SNX13-205ENST00000471744 LRIT2A6NDA9 550 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 VSTM2BA6NLU5 285 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 GALR3O60755 368 aaPredicted RBP14.33□□□□□ -0.12
SNX13-205ENST00000471744 KLF7O75840 302 aaPredicted RBP14.33□□□□□ -0.12
SNX13-205ENST00000471744 KLHL18O94889 574 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 IGHEP01854 428 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 ZNF888P0CJ79 500 aaPredicted RBP14.33□□□□□ -0.12
SNX13-205ENST00000471744 PCNAP12004 261 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 RHDQ02161 417 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 HYAL2Q12891 473 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 LCP2Q13094 533 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 NKG7Q16617 165 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 CPSF6Q16630 551 aaKnown RBP eCLIP14.33□□□□□ -0.12
SNX13-205ENST00000471744 TMEM35AQ53FP2 167 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 CFAP157Q5JU67 520 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 LIPMQ5VYY2 423 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 TRIM40Q6P9F5 258 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 CHSY3Q70JA7 882 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 HOMEZQ8IX15 550 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 AMER3Q8N944 861 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 ARMC2Q8NEN0 867 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 OR2L5Q8NG80 312 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 OR52B6Q8NGF0 335 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 STT3BQ8TCJ2 826 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 TCP10LQ8TDR4 215 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.33□□□□□ -0.12
SNX13-205ENST00000471744 THAP4Q8WY91 577 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 MIEF2Q96C03 454 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 MS4A6EQ96DS6 147 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 CMTM7Q96FZ5 175 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 VPS50Q96JG6 964 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 FAR2Q96K12 515 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 FAM111AQ96PZ2 611 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 ZNF382Q96SR6 550 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 TGIF2Q9GZN2 237 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 ROGDIQ9GZN7 287 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 REXO4Q9GZR2 422 aaKnown RBP14.33□□□□□ -0.12
SNX13-205ENST00000471744 PSD3Q9NYI0 1048 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 TRPC4Q9UBN4 977 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 CTSFQ9UBX1 484 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 TRPS1Q9UHF7 1281 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 PPT2Q9UMR5 302 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 POLHQ9Y253 713 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 RNF11Q9Y3C5 154 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 NAALAD2Q9Y3Q0 740 aa14.33□□□□□ -0.12
SNX13-205ENST00000471744 SCN2AQ99250 2005 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 NUP210LQ5VU65 1888 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 FOXE1O00358 373 aaPredicted RBP14.32□□□□□ -0.12
SNX13-205ENST00000471744 PCDH17O14917 1159 aa14.32□□□□□ -0.12
SNX13-205ENST00000471744 TM9SF1O15321 606 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms