RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 ATXN7L3BQ96GX2 97 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 SLC45A3Q96JT2 553 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 CABS1Q96KC9 395 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 FAM218AQ96MZ4 157 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 OVOL2Q9BRP0 275 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 RIMS4Q9H426 269 aaPredicted RBP3.27□□□□□ -1.89
BRCA2-202ENST00000470094 LMAN1LQ9HAT1 526 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 RAVER2Q9HCJ3 691 aaKnown RBP3.27□□□□□ -1.89
BRCA2-202ENST00000470094 TUFT1Q9NNX1 390 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 IL1RAPL2Q9NP60 686 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 TBC1D13Q9NVG8 400 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 IL36AQ9UHA7 158 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 ITGA11Q9UKX5 1188 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 KNSTRNQ9Y448 316 aa3.27□□□□□ -1.89
BRCA2-202ENST00000470094 COL5A2P05997 1499 aaPredicted RBP3.27□□□□□ -1.89
BRCA2-202ENST00000470094 TP53BP1Q12888 1972 aaPredicted RBP3.27□□□□□ -1.89
BRCA2-202ENST00000470094 A0A1W2PPW3 197 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 LRRD1A4D1F6 860 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 C17orf105B2RV13 164 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 DDX39AO00148 427 aaKnown RBP3.26□□□□□ -1.89
BRCA2-202ENST00000470094 SLC33A1O00400 549 aaPredicted RBP3.26□□□□□ -1.89
BRCA2-202ENST00000470094 SURF4O15260 269 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 THEGLP0DJG4 465 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 TCF4P15884 667 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 ASIC1P78348 528 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 DHODHQ02127 395 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 TRA2AQ13595 282 aaKnown RBP eCLIP3.26□□□□□ -1.89
BRCA2-202ENST00000470094 RCN2Q14257 317 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 LASP1Q14847 261 aaKnown RBP3.26□□□□□ -1.89
BRCA2-202ENST00000470094 FAM189A2Q15884 450 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 CDO1Q16878 200 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 LRRC73Q5JTD7 316 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 TXNRD3NBQ6F5E7 133 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 ZNF343Q6P1L6 599 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 LCLAT1Q6UWP7 414 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 TMEM182Q6ZP80 229 aaPredicted RBP3.26□□□□□ -1.89
BRCA2-202ENST00000470094 FAM219AQ8IW50 185 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 TCEANCQ8N8B7 351 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 ARL10Q8N8L6 244 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 OR7G3Q8NG95 312 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.26□□□□□ -1.89
BRCA2-202ENST00000470094 LRRC15Q8TF66 581 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 CHURC1Q8WUH1 139 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 HEXDCQ8WVB3 486 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 KRT35Q92764 455 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 TEKT1Q969V4 418 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 EXOC4Q96A65 974 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 CNRIP1Q96F85 164 aaPredicted RBP3.26□□□□□ -1.89
BRCA2-202ENST00000470094 CCDC43Q96MW1 224 aaKnown RBP3.26□□□□□ -1.89
BRCA2-202ENST00000470094 GAL3ST4Q96RP7 486 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 LGMNQ99538 433 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 NDNQ99608 321 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 CACNG6Q9BXT2 260 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 CNIH4Q9P003 139 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 HACD3Q9P035 362 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 SEPT10Q9P0V9 454 aa3.26□□□□□ -1.89
BRCA2-202ENST00000470094 NPHP3Q7Z494 1330 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 YDJCA8MPS7 323 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 ZNF263O14978 683 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 HTATSF1O43719 755 aaKnown RBP3.25□□□□□ -1.89
BRCA2-202ENST00000470094 CYTIPO60759 359 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 KINO60870 393 aaKnown RBP3.25□□□□□ -1.89
BRCA2-202ENST00000470094 MT-ND3P03897 115 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 RLN1P04808 185 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 F3P13726 295 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 STMN1P16949 149 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 ATP6V1E1P36543 226 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 PTENP60484 403 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 PAX8Q06710 450 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 ACTN3Q08043 901 aaPredicted RBP3.25□□□□□ -1.89
BRCA2-202ENST00000470094 FAM174BQ3ZCQ3 159 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 LBHQ53QV2 105 aaPredicted RBP3.25□□□□□ -1.89
BRCA2-202ENST00000470094 SUSD4Q5VX71 490 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 OR4C11Q6IEV9 310 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 TTC27Q6P3X3 843 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 PRSS55Q6UWB4 352 aaPredicted RBP3.25□□□□□ -1.89
BRCA2-202ENST00000470094 GDPGP1Q6ZNW5 385 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 GET4Q7L5D6 327 aaPredicted RBP3.25□□□□□ -1.89
BRCA2-202ENST00000470094 NRARPQ7Z6K4 114 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 ZFAND4Q86XD8 727 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 DZIP1Q86YF9 867 aaKnown RBP3.25□□□□□ -1.89
BRCA2-202ENST00000470094 SPEM1Q8N4L4 309 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 OR8H1Q8NGG4 311 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 OR2L2Q8NH16 312 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 C11orf45Q8TAV5 145 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 SLC26A7Q8TE54 656 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 RAD54LQ92698 747 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 RASL10AQ92737 203 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 CDHR1Q96JP9 859 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 PARK7Q99497 189 aaKnown RBP3.25□□□□□ -1.89
BRCA2-202ENST00000470094 PI4K2AQ9BTU6 479 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 UTP14AQ9BVJ6 771 aaKnown RBP3.25□□□□□ -1.89
BRCA2-202ENST00000470094 ACAT2Q9BWD1 397 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 TRIM6Q9C030 488 aaPredicted RBP3.25□□□□□ -1.89
BRCA2-202ENST00000470094 TMEM206Q9H813 350 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 MID1IP1Q9NPA3 183 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 IARS2Q9NSE4 1012 aaKnown RBP3.25□□□□□ -1.89
BRCA2-202ENST00000470094 DNAJC17Q9NVM6 304 aaKnown RBP3.25□□□□□ -1.89
BRCA2-202ENST00000470094 ZHX2Q9Y6X8 837 aa3.25□□□□□ -1.89
BRCA2-202ENST00000470094 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms