RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 DENND6BQ8NEG7 585 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 OR10G2Q8NGC3 310 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 OR52N2Q8NGI0 321 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 CDC26Q8NHZ8 85 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 KCNC2Q96PR1 638 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 RIOK2Q9BVS4 552 aaKnown RBP13.12□□□□□ -0.31
BRCA1-209ENST00000470026 REEP4Q9H6H4 257 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 RUBCNLQ9H714 662 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 POFUT2Q9Y2G5 429 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 UGT2A1Q9Y4X1 527 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 ISPDA4D126 451 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 MGAT4DA6NG13 374 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 OR2AG2A6NM03 316 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 TAF4O00268 1085 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 FOXE1O00358 373 aaPredicted RBP13.12□□□□□ -0.31
BRCA1-209ENST00000470026 TSPAN6O43657 245 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 AIREO43918 545 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 PQBP1O60828 265 aaKnown RBP13.12□□□□□ -0.31
BRCA1-209ENST00000470026 GNRH1P01148 92 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 SRPRAP08240 638 aaKnown RBP13.12□□□□□ -0.31
BRCA1-209ENST00000470026 C21orf33P30042 268 aaPredicted RBP13.12□□□□□ -0.31
BRCA1-209ENST00000470026 HMGA2P52926 109 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 CTSCP53634 463 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 FBXO43Q4G163 708 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 IFI44LQ53G44 452 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 ZNF648Q5T619 568 aaPredicted RBP13.12□□□□□ -0.31
BRCA1-209ENST00000470026 ADIPOR2Q86V24 386 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 TMEM25Q86YD3 366 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 RAVER1Q8IY67 606 aaKnown RBP13.12□□□□□ -0.31
BRCA1-209ENST00000470026 RASGEF1AQ8N9B8 481 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 OR4A15Q8NGL6 344 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 MCFD2Q8NI22 146 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 TMEM159Q96B96 161 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 C1GALT1Q9NS00 363 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 ZNF226Q9NYT6 803 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 SCHIP1Q9P0W5 487 aaPredicted RBP13.12□□□□□ -0.31
BRCA1-209ENST00000470026 SPASTQ9UBP0 616 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 TESMINQ9Y4I5 508 aa13.12□□□□□ -0.31
BRCA1-209ENST00000470026 PCM1Q15154 2024 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 ALPK3Q96L96 1907 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 MYOFQ9NZM1 2061 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 CARNS1A5YM72 827 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 TIMP2P16035 220 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 LAG3P18627 525 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 AQP1P29972 269 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 ETV3P41162 512 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 CTSKP43235 329 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 BDKRB1P46663 353 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 RPS13P62277 151 aaKnown RBP13.11□□□□□ -0.31
BRCA1-209ENST00000470026 HBA1P69905 142 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 ZNF763Q0D2J5 394 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 NOGQ13253 232 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 DMC1Q14565 340 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 EIF4HQ15056 248 aaKnown RBP13.11□□□□□ -0.31
BRCA1-209ENST00000470026 MICAQ29983 383 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 ZNF404Q494X3 552 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 CRB2Q5IJ48 1285 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 COX20Q5RI15 118 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 GCNT6Q5T4J0 391 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 MED27Q6P2C8 311 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 CNKSR3Q6P9H4 555 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 ZNF852Q6ZMS4 543 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 KIAA0907Q7Z7F0 614 aaPredicted RBP13.11□□□□□ -0.31
BRCA1-209ENST00000470026 LILRA3Q8N6C8 439 aaPredicted RBP13.11□□□□□ -0.31
BRCA1-209ENST00000470026 SPPL2AQ8TCT8 520 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 PROX1Q92786 737 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 FOXJ1Q92949 421 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 NEIL2Q969S2 332 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 MED8Q96G25 268 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 SAMD11Q96NU1 681 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 HEPHQ9BQS7 1158 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 CCM2Q9BSQ5 444 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 SP140LQ9H930 580 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 RLIMQ9NVW2 624 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 PCDHGA3Q9Y5H0 932 aa13.11□□□□□ -0.31
BRCA1-209ENST00000470026 A0A1W2PRU2 124 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 TGM5O43548 720 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 ATG13O75143 517 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 CNOT3O75175 753 aaKnown RBP13.1□□□□□ -0.31
BRCA1-209ENST00000470026 UPK1BO75841 260 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 KLHL18O94889 574 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 ETFAP13804 333 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 GJA1P17302 382 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 GADD45AP24522 165 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 CD300CQ08708 224 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 SYT16Q17RD7 645 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 TIGD6Q17RP2 521 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 MPEG1Q2M385 716 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 TOR1AIP1Q5JTV8 583 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 LILRA6Q6PI73 481 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 USP43Q70EL4 1123 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 ARMCX6Q7L4S7 300 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 ZNF605Q86T29 641 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 LAS2Q8IYD9 372 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 DEPDC4Q8N2C3 294 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 REPS1Q96D71 796 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 COL21A1Q96P44 957 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 EHD1Q9H4M9 534 aa13.1□□□□□ -0.31
BRCA1-209ENST00000470026 CCDC59Q9P031 241 aaKnown RBP13.1□□□□□ -0.31
BRCA1-209ENST00000470026 SH3BP4Q9P0V3 963 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms