RNA–Protein interactions for RNA: ENST00000469608.5

CALCA-204, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-204ENST00000469608 NDC80O14777 642 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 RAD51CO43502 376 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 CHST10O43529 356 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 B4GALT2O60909 372 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 DNAJB6O75190 326 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 WDR47O94967 919 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 CLDN1O95832 211 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 NCF1P14598 390 aaPredicted RBP13.35□□□□□ -0.27
CALCA-204ENST00000469608 COL8A1P27658 744 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 SSTR1P30872 391 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 OR4D2P58180 307 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 RAB8AP61006 207 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 SKP1P63208 163 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 SRSF11Q05519 484 aaKnown RBP13.35□□□□□ -0.27
CALCA-204ENST00000469608 ACTN3Q08043 901 aaPredicted RBP13.35□□□□□ -0.27
CALCA-204ENST00000469608 INAQ16352 499 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 RPUSD3Q6P087 351 aaKnown RBP13.35□□□□□ -0.27
CALCA-204ENST00000469608 NXPE4Q6UWF7 544 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 MAMDC2Q7Z304 686 aaPredicted RBP13.35□□□□□ -0.27
CALCA-204ENST00000469608 BEST3Q8N1M1 668 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 C17orf53Q8N3J3 647 aaPredicted RBP13.35□□□□□ -0.27
CALCA-204ENST00000469608 SPATA6LQ8N4H0 392 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 ANKRD53Q8N9V6 530 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 SUN3Q8TAQ9 357 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 NT5CQ8TCD5 201 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 TBC1D20Q96BZ9 403 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 OR1F2PQ96R84 312 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 RNF32Q9H0A6 362 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 CAB39LQ9H9S4 337 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 STMN3Q9NZ72 180 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 TXNDC16Q9P2K2 825 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 KCNE2Q9Y6J6 123 aa13.35□□□□□ -0.27
CALCA-204ENST00000469608 CRYBG3Q68DQ2 2970 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 FAM187AA6NFU0 413 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 MAGEB17A8MXT2 336 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 CXorf49A8MYA2 514 aaPredicted RBP13.34□□□□□ -0.27
CALCA-204ENST00000469608 PHGDHO43175 533 aaKnown RBP13.34□□□□□ -0.27
CALCA-204ENST00000469608 LRRTM2O43300 516 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 PRAMEF2O60811 474 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 JAK1P23458 1154 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 AHRP35869 848 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 GDF5P43026 501 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 HNMTP50135 292 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 KCNK10P57789 538 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 CDKL1Q00532 357 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 PMP22Q01453 160 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 USP10Q14694 798 aaKnown RBP13.34□□□□□ -0.27
CALCA-204ENST00000469608 EXT1Q16394 746 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 TOR1AIP1Q5JTV8 583 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 ACER2Q5QJU3 275 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.34□□□□□ -0.27
CALCA-204ENST00000469608 CYP4X1Q8N118 509 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 SPATA4Q8NEY3 305 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 UTP15Q8TED0 518 aaKnown RBP13.34□□□□□ -0.27
CALCA-204ENST00000469608 ANKRD7Q92527 254 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 NR4A3Q92570 626 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 LPAR4Q99677 370 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 ERP44Q9BS26 406 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 SLC6A16Q9GZN6 736 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 RHBGQ9H310 441 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 KLHL31Q9H511 634 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 POPDC3Q9HBV1 291 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 ANKRD10Q9NXR5 420 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 WHRNQ9P202 907 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 MTO1Q9Y2Z2 717 aaKnown RBP13.34□□□□□ -0.27
CALCA-204ENST00000469608 ITPR2Q14571 2701 aa13.34□□□□□ -0.27
CALCA-204ENST00000469608 WIPF3A6NGB9 483 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 C4orf51C9J302 202 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 PSMD12O00232 456 aaPredicted RBP13.33□□□□□ -0.28
CALCA-204ENST00000469608 MAN1A2O60476 641 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 RASAL1O95294 804 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 IL10P22301 178 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 TDGF1P3P51864 188 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 POU4F1Q01851 419 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 SLBPQ14493 270 aaKnown RBP eCLIP13.33□□□□□ -0.28
CALCA-204ENST00000469608 FBXO48Q5FWF7 155 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 C1QL3Q5VWW1 255 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 ZNF324BQ6AW86 544 aaPredicted RBP13.33□□□□□ -0.28
CALCA-204ENST00000469608 NIPAL1Q6NVV3 410 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 MAATS1Q7Z4T9 603 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 CCDC25Q86WR0 208 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 CRLF3Q8IUI8 442 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 PLPP5Q8NEB5 264 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 TRPV3Q8NET8 790 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 CCT6BQ92526 530 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 CDKL2Q92772 493 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 EXT2Q93063 718 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 TSPAN17Q96FV3 270 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 ZNF354BQ96LW1 612 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 MCMBPQ9BTE3 642 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 WWOXQ9NZC7 414 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 GRHL1Q9NZI5 618 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 ABI3Q9P2A4 366 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 PCNX1Q96RV3 2341 aa13.33□□□□□ -0.28
CALCA-204ENST00000469608 A0A0G2JN53 185 aa13.32□□□□□ -0.28
CALCA-204ENST00000469608 TCRBV9S1A1TA0A576 114 aa13.32□□□□□ -0.28
CALCA-204ENST00000469608 URADA6NGE7 173 aa13.32□□□□□ -0.28
CALCA-204ENST00000469608 CCDC166P0CW27 439 aa13.32□□□□□ -0.28
CALCA-204ENST00000469608 RNH1P13489 461 aaKnown RBP13.32□□□□□ -0.28
CALCA-204ENST00000469608 GNAZP19086 355 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms