RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 MEP1AQ16819 746 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 HADHQ16836 314 aaKnown RBP4.94□□□□□ -1.62
PTPN4-209ENST00000469511 NKPD1Q17RQ9 610 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 TYSND1Q2T9J0 566 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 GXYLT1Q4G148 440 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 FIGNQ5HY92 759 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 YOD1Q5VVQ6 348 aaPredicted RBP4.94□□□□□ -1.62
PTPN4-209ENST00000469511 PLAG1Q6DJT9 500 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 TMEM211Q6ICI0 200 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 PRMT9Q6P2P2 845 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 POMZP3Q6PJE2 187 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 UNC5DQ6UXZ4 953 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 RANBP10Q6VN20 620 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 RNF44Q7L0R7 432 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 TAS2R42Q7RTR8 314 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 PID1Q7Z2X4 250 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 MDGA2Q7Z553 956 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 SNX20Q7Z614 316 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 CAMKMTQ7Z624 323 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 THAP5Q7Z6K1 395 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 ANKRD37Q7Z713 158 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 PLD3Q8IV08 490 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 CLYBLQ8N0X4 340 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 TMEM178AQ8NBL3 297 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 RELL2Q8NC24 303 aaPredicted RBP4.94□□□□□ -1.62
PTPN4-209ENST00000469511 OR2A1Q8NGT9 310 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 OR2L8Q8NGY9 312 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 GOT1L1Q8NHS2 421 aaPredicted RBP4.94□□□□□ -1.62
PTPN4-209ENST00000469511 LINC01560Q8TB33 94 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 DENND1AQ8TEH3 1009 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 TSLPQ969D9 159 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 KIAA1191Q96A73 305 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 HAUS1Q96CS2 278 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 CABS1Q96KC9 395 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 TTYH2Q9BSA4 534 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 CNPPD1Q9BV87 410 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 ACAT2Q9BWD1 397 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 PACSIN1Q9BY11 444 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 DEPPQ9NTK1 212 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 HAUS2Q9NVX0 235 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 SMARCAL1Q9NZC9 954 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 IL1RAPL1Q9NZN1 696 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 AIPL1Q9NZN9 384 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 HACD3Q9P035 362 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 TRPS1Q9UHF7 1281 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 POLG2Q9UHN1 485 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 HYOU1Q9Y4L1 999 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 U3KQE9 123 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 YLPM1P49750 1951 aaKnown RBP4.94□□□□□ -1.62
PTPN4-209ENST00000469511 RAI1Q7Z5J4 1906 aaPredicted RBP4.93□□□□□ -1.62
PTPN4-209ENST00000469511 MED12LQ86YW9 2145 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 A0A0G2JMM0 328 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 A0A1W2PPB8 328 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 A0A1W2PRS3 328 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 OR2A25A4D2G3 310 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 LRRC10BA6NIK2 292 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 C2orf81A6NN90 581 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 FAM166BA8MTA8 275 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 KIR3DP1A8MWS1 328 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 APOL1O14791 398 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 RASGRF2O14827 1237 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 LIN7AO14910 233 aaPredicted RBP4.93□□□□□ -1.62
PTPN4-209ENST00000469511 TFECO14948 347 aaPredicted RBP4.93□□□□□ -1.62
PTPN4-209ENST00000469511 SRPX2O60687 465 aaPredicted RBP4.93□□□□□ -1.62
PTPN4-209ENST00000469511 CCDC172P0C7W6 258 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 MYBL1P10243 752 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 RALBP11234 206 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 ICAM2P13598 275 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 ITGALP20701 1170 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 UQCRC1P31930 480 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 ZFP36L2P47974 494 aaKnown RBP4.93□□□□□ -1.62
PTPN4-209ENST00000469511 DCAF7P61962 342 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 SEMA3AQ14563 771 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 PDK1Q15118 436 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 MUM1Q2TAK8 710 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 SFT2D3Q587I9 215 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 Q5PR19 223 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 MFSD4BQ5TF39 518 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 ZNF585AQ6P3V2 769 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 MFSD7Q6UXD7 560 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 C16orf47Q6ZP98 133 aaPredicted RBP4.93□□□□□ -1.62
PTPN4-209ENST00000469511 SEM1Q6ZVN7 128 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 WDR53Q7Z5U6 358 aaPredicted RBP4.93□□□□□ -1.62
PTPN4-209ENST00000469511 RFX6Q8HWS3 928 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 LGI4Q8N135 537 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 KRT222Q8N1A0 295 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 NAXEQ8NCW5 288 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 OR2L3Q8NG85 312 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 OR5M3Q8NGP4 307 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 OR9A4Q8NGU2 314 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 C16orf52Q8NHV5 167 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 ZUFSPQ96AP4 578 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 ULK4Q96C45 1275 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 Q96MF0 132 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 ZNF830Q96NB3 372 aaPredicted RBP4.93□□□□□ -1.62
PTPN4-209ENST00000469511 OLFM1Q99784 485 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 ZFYVE21Q9BQ24 234 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 PLCD4Q9BRC7 762 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 DPH7Q9BTV6 452 aa4.93□□□□□ -1.62
PTPN4-209ENST00000469511 TP63Q9H3D4 680 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms