RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 HDAC3O15379 428 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 HCRTR1O43613 425 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 CHEK2O96017 543 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 KRT6AP02538 564 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 KRT6BP04259 564 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 PORP16435 677 aaPredicted RBP6.56□□□□□ -1.36
SCAF4-204ENST00000467731 DRD4P21917 467 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 BCL6P41182 706 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 SCTRP47872 440 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 KRT6CP48668 564 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 TUBA4AP68366 448 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 CYP4F2P78329 520 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 BTKQ06187 659 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 TRIP6Q15654 476 aaKnown RBP6.56□□□□□ -1.36
SCAF4-204ENST00000467731 DEFB110Q30KQ9 67 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 CMPK2Q5EBM0 449 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 DDIASQ8IXT1 998 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.56□□□□□ -1.36
SCAF4-204ENST00000467731 AFAP1L2Q8N4X5 818 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 USP7Q93009 1102 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 C19orf60Q96EN9 201 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 SARGQ9BW04 601 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 TRIM55Q9BYV6 548 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 PRM3Q9NNZ6 103 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 FKBP14Q9NWM8 211 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 SOHLH2Q9NX45 425 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 ANKMY1Q9P2S6 941 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 SPTBN4Q9H254 2564 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 A0A0G2JND7 137 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 IGHV5-10-1A0A0J9YXX1 117 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 ATP6AP2A0A1C7CYW4 349 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 TRBC2A0A5B9 178 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 MAGEB17A8MXT2 336 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 SLCO1B7G3V0H7 640 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 MANBAO00462 879 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 SH3BGRLO75368 114 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 ATP6AP2O75787 350 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 ZBTB11O95625 1053 aaPredicted RBP6.56□□□□□ -1.36
SCAF4-204ENST00000467731 LINC00032P0C843 101 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 GSTT2P0CG29 244 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 GSTT2BP0CG30 244 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 ATXN8OSP0DMR3 200 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 THRAP10827 490 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 UBL4AP11441 157 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 EPHA3P29320 983 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 GSTT1P30711 240 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 AQP5P55064 265 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 RPS15AP62244 130 aaKnown RBP6.56□□□□□ -1.36
SCAF4-204ENST00000467731 TAF11Q15544 211 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 FRMPD2BQ6IN97 320 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 FBXO42Q6P3S6 717 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 PRSS42Q7Z5A4 293 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 VN1R5Q7Z5H4 357 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 SCAIQ8N9R8 606 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 SPERTQ8NA61 448 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 RFWD2Q8NHY2 731 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 UBE2E3Q969T4 207 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 REPS1Q96D71 796 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 FAR2Q96K12 515 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 C3orf30Q96M34 536 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 ZFYVE21Q9BQ24 234 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 EBF4Q9BQW3 602 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 PITHD1Q9GZP4 211 aaPredicted RBP6.56□□□□□ -1.36
SCAF4-204ENST00000467731 NSRP1Q9H0G5 558 aaKnown RBP6.56□□□□□ -1.36
SCAF4-204ENST00000467731 KCNK13Q9HB14 408 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 SEMA5BQ9P283 1151 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 PILRAQ9UKJ1 303 aa6.56□□□□□ -1.36
SCAF4-204ENST00000467731 ANKDD1BA6NHY2 528 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 AGRPO00253 132 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 HNRNPRO43390 633 aaKnown RBP6.55□□□□□ -1.36
SCAF4-204ENST00000467731 RFPL3O75679 317 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 TBX6O95947 436 aaPredicted RBP6.55□□□□□ -1.36
SCAF4-204ENST00000467731 STATHP02808 62 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 MLLT3P42568 568 aaPredicted RBP6.55□□□□□ -1.36
SCAF4-204ENST00000467731 HK2P52789 917 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 PDX1P52945 283 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 HMGCS1Q01581 520 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 KCNAB1Q14722 419 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 SLC9B1Q4ZJI4 515 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 RNF44Q7L0R7 432 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 B3GNT8Q7Z7M8 397 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 SLITRK4Q8IW52 837 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 SCUBE1Q8IWY4 988 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 CARFQ8N187 725 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 OR2T11Q8NH01 316 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 NETO1Q8TDF5 533 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 ERP27Q96DN0 273 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 TCTN2Q96GX1 697 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 CCDC74BQ96LY2 380 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 CATSPER2Q96P56 530 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 OR2A5Q96R48 311 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 CCT8L2Q96SF2 557 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 DPYSL5Q9BPU6 564 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 ELAC2Q9BQ52 826 aaKnown RBP6.55□□□□□ -1.36
SCAF4-204ENST00000467731 MACROD1Q9BQ69 325 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 ACPTQ9BZG2 426 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 RHBGQ9H310 441 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 MEAF6Q9HAF1 191 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 PDE7BQ9NP56 450 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 PDP2Q9P2J9 529 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms