RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 THAP4Q8WY91 577 aa12.91□□□□□ -0.34
SSBP1-206ENST00000467681 ATP6V1E2Q96A05 226 aa12.91□□□□□ -0.34
SSBP1-206ENST00000467681 NSUN5Q96P11 429 aaKnown RBP12.91□□□□□ -0.34
SSBP1-206ENST00000467681 YIPF2Q9BWQ6 316 aa12.91□□□□□ -0.34
SSBP1-206ENST00000467681 ERVK-6Q9BXR3 956 aa12.91□□□□□ -0.34
SSBP1-206ENST00000467681 TGIF2Q9GZN2 237 aa12.91□□□□□ -0.34
SSBP1-206ENST00000467681 AICDAQ9GZX7 198 aa12.91□□□□□ -0.34
SSBP1-206ENST00000467681 CLK4Q9HAZ1 481 aaKnown RBP12.91□□□□□ -0.34
SSBP1-206ENST00000467681 MKKSQ9NPJ1 570 aaPredicted RBP12.91□□□□□ -0.34
SSBP1-206ENST00000467681 TRPC4Q9UBN4 977 aa12.91□□□□□ -0.34
SSBP1-206ENST00000467681 CTSFQ9UBX1 484 aa12.91□□□□□ -0.34
SSBP1-206ENST00000467681 ADGRE2Q9UHX3 823 aa12.91□□□□□ -0.34
SSBP1-206ENST00000467681 PLLPQ9Y342 182 aa12.91□□□□□ -0.34
SSBP1-206ENST00000467681 RNF11Q9Y3C5 154 aa12.91□□□□□ -0.34
SSBP1-206ENST00000467681 H0YIV9 168 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 SGK494L7N484 410 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 PPP6CO00743 305 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 CTIFO43310 598 aaKnown RBP12.9□□□□□ -0.34
SSBP1-206ENST00000467681 ZGLP1P0C6A0 271 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 ZNF888P0CJ79 500 aaPredicted RBP12.9□□□□□ -0.34
SSBP1-206ENST00000467681 MYL2P10916 166 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 CPA3P15088 417 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 SERPINB1P30740 379 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 CCNG1P51959 295 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 FOXL2P58012 376 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 STXBP1P61764 594 aaKnown RBP12.9□□□□□ -0.34
SSBP1-206ENST00000467681 MAT1AQ00266 395 aaKnown RBP12.9□□□□□ -0.34
SSBP1-206ENST00000467681 IL10RAQ13651 578 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 DEFB109BQ30KR1 87 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 ADPRMQ3LIE5 342 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 DEFB134Q4QY38 66 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 VWA2Q5GFL6 755 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 TOR1AIP1Q5JTV8 583 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 ZNF678Q5SXM1 525 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 CEP85LQ5SZL2 805 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 ADNP2Q6IQ32 1131 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 LRIG3Q6UXM1 1119 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 ABHD13Q7L211 337 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 PRSS41Q7RTY9 318 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 MILR1Q7Z6M3 343 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 LAPTM4BQ86VI4 370 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 SRRM1Q8IYB3 904 aaKnown RBP12.9□□□□□ -0.34
SSBP1-206ENST00000467681 OR51Q1Q8NH59 317 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 PPP4R1Q8TF05 950 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 CCT6BQ92526 530 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 TTC9Q92623 222 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 NACC2Q96BF6 587 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 MIEF2Q96C03 454 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 MS4A6EQ96DS6 147 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 CCDC126Q96EE4 140 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 SPSB2Q99619 263 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 C12orf65Q9H3J6 166 aaKnown RBP12.9□□□□□ -0.34
SSBP1-206ENST00000467681 MKS1Q9NXB0 559 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 POLHQ9Y253 713 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 NAALAD2Q9Y3Q0 740 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 PCDHGA11Q9Y5H2 935 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 SPTA1P02549 2419 aa12.9□□□□□ -0.34
SSBP1-206ENST00000467681 KMT2BQ9UMN6 2715 aaPredicted RBP12.89□□□□□ -0.35
SSBP1-206ENST00000467681 FFAR3O14843 346 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 RGS16O15492 202 aaPredicted RBP12.89□□□□□ -0.35
SSBP1-206ENST00000467681 GPR42O15529 346 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 DNAJB6O75190 326 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 SUPT7LO94864 414 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 BMP10O95393 424 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 B3GALT4O96024 378 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 HNRNPH1P31943 449 aaKnown RBP12.89□□□□□ -0.35
SSBP1-206ENST00000467681 HPDP32754 393 aaPredicted RBP12.89□□□□□ -0.35
SSBP1-206ENST00000467681 PIK3CBP42338 1070 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 DNAJB13P59910 316 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 RAB8AP61006 207 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 SKP1P63208 163 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 BTN3A2P78410 334 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 CLCQ05315 142 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 TRAF3Q13114 568 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 CPSF6Q16630 551 aaKnown RBP eCLIP12.89□□□□□ -0.35
SSBP1-206ENST00000467681 SYT16Q17RD7 645 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 LINC00303Q3SY05 128 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 TNFAIP8L3Q5GJ75 292 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 RAB43Q86YS6 212 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 MYLK4Q86YV6 388 aaPredicted RBP12.89□□□□□ -0.35
SSBP1-206ENST00000467681 OR52B6Q8NGF0 335 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 HUS1BQ8NHY5 278 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 RDH11Q8TC12 318 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 EXTL1Q92935 676 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 REPS1Q96D71 796 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 L3HYPDHQ96EM0 354 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 WBP1Q96G27 269 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 IP6K3Q96PC2 410 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 ZIM3Q96PE6 472 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 F2RL3Q96RI0 385 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 SOX17Q9H6I2 414 aaPredicted RBP12.89□□□□□ -0.35
SSBP1-206ENST00000467681 SEMA4BQ9NPR2 832 aaPredicted RBP12.89□□□□□ -0.35
SSBP1-206ENST00000467681 PSD3Q9NYI0 1048 aa12.89□□□□□ -0.35
SSBP1-206ENST00000467681 DSPP15924 2871 aaKnown RBP12.88□□□□□ -0.35
SSBP1-206ENST00000467681 CHST10O43529 356 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 RDH16O75452 317 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 OTCP00480 354 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 TGFB1P01137 390 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 IGHEP01854 428 aa12.88□□□□□ -0.35
SSBP1-206ENST00000467681 PCNAP12004 261 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms