RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 T-ENOLP0DO92 83 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 KCNA5P22460 613 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 UQCRC2P22695 453 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 KCNC4Q03721 635 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 C18orf21Q32NC0 220 aaPredicted RBP13.29□□□□□ -0.28
BRAT1-203ENST00000467558 CEP78Q5JTW2 689 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 OGFOD2Q6N063 350 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.29□□□□□ -0.28
BRAT1-203ENST00000467558 ADGRD2Q7Z7M1 963 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 OR10Q1Q8NGQ4 319 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 DGAT2Q96PD7 388 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 DPH7Q9BTV6 452 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 TPK1Q9H3S4 243 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 CYP8B1Q9UNU6 501 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 WBP11Q9Y2W2 641 aaKnown RBP13.29□□□□□ -0.28
BRAT1-203ENST00000467558 RPL36Q9Y3U8 105 aaKnown RBP13.29□□□□□ -0.28
BRAT1-203ENST00000467558 TAF1LQ8IZX4 1826 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 MYO7AQ13402 2215 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 CFIP05156 583 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 IL3P08700 152 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 HSD17B1P14061 328 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 GRK6P43250 576 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 KCNC1P48547 511 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 ARSFP54793 590 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 ELOCQ15369 112 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 WDR45BQ5MNZ6 344 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 MZT2BQ6NZ67 158 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 LAPTM4BQ86VI4 370 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 KAT2AQ92830 837 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 RDH12Q96NR8 316 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 FCRL4Q96PJ5 515 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 KCNC2Q96PR1 638 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 RPF2Q9H7B2 306 aaKnown RBP13.29□□□□□ -0.28
BRAT1-203ENST00000467558 RMI1Q9H9A7 625 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 MRPS7Q9Y2R9 242 aaKnown RBP13.29□□□□□ -0.28
BRAT1-203ENST00000467558 ASNA1O43681 348 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 AIREO43918 545 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 NUAK1O60285 661 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 GABBR2O75899 941 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 CYP17A1P05093 508 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 KDELR2P33947 212 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 GRIN2CQ14957 1233 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 KLHL22Q53GT1 634 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 PERM1Q5SV97 790 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 UBXN10Q96LJ8 280 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 SMIM14Q96QK8 99 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 SPRTNQ9H040 489 aaPredicted RBP13.29□□□□□ -0.28
BRAT1-203ENST00000467558 KAT8Q9H7Z6 458 aaKnown RBP13.29□□□□□ -0.28
BRAT1-203ENST00000467558 NEK6Q9HC98 313 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 PTTG2Q9NZH5 202 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 OR1A2Q9Y585 309 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 SLC30A4O14863 429 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 DIRAS1O95057 198 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 HMGN1P05114 100 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 C8orf89P0DMQ9 161 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 ATP5A1P25705 553 aaKnown RBP13.28□□□□□ -0.28
BRAT1-203ENST00000467558 GABRB3P28472 473 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 XKP51811 444 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 CCNIQ14094 377 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 PIGGQ5H8A4 983 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 LHX8Q68G74 356 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 CYP4V2Q6ZWL3 525 aaPredicted RBP13.28□□□□□ -0.28
BRAT1-203ENST00000467558 POC5Q8NA72 575 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 TMIEQ8NEW7 156 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 MOAP1Q96BY2 351 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 PDLIM5Q96HC4 596 aaKnown RBP13.28□□□□□ -0.28
BRAT1-203ENST00000467558 S100A13Q99584 98 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 AMBNQ9NP70 447 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 ZC4H2Q9NQZ6 224 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 PTBP2Q9UKA9 531 aaKnown RBP13.28□□□□□ -0.28
BRAT1-203ENST00000467558 CFL2Q9Y281 166 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 DOCK1Q14185 1865 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 WNK3Q9BYP7 1800 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 PGRMC2O15173 223 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 TIMP2P16035 220 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 HMGA1P17096 107 aaKnown RBP13.28□□□□□ -0.28
BRAT1-203ENST00000467558 MATN1P21941 496 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 MRPL58Q14197 206 aaKnown RBP13.28□□□□□ -0.28
BRAT1-203ENST00000467558 PARS2Q7L3T8 475 aaKnown RBP13.28□□□□□ -0.28
BRAT1-203ENST00000467558 AMIGO1Q86WK6 493 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.28□□□□□ -0.28
BRAT1-203ENST00000467558 OR4K14Q8NGD5 310 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 MOSPD2Q8NHP6 518 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 ZNF483Q8TF39 744 aaPredicted RBP13.28□□□□□ -0.28
BRAT1-203ENST00000467558 NDC1Q9BTX1 674 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 TRIM8Q9BZR9 551 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 TMEM30AQ9NV96 361 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 LOC100130705A0A1B0GUX0 176 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 A0A1B0GW55 424 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 GLOD5A6NK44 160 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 HTRA2O43464 458 aaPredicted RBP13.28□□□□□ -0.28
BRAT1-203ENST00000467558 REM1O75628 298 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 GJB3O75712 270 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 PRAMEF12O95522 483 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 DUX4L2P0CJ85 424 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 DUX4L3P0CJ86 424 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 DUX4L4P0CJ87 422 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 DUX4L5P0CJ88 424 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 DUX4L6P0CJ89 424 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 DUX4L7P0CJ90 424 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms