RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 TXNDC8Q6A555 127 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 CLEC20AQ6ZU45 233 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 MARCH9Q86YJ5 346 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 SIAH1Q8IUQ4 282 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 NR4A3Q92570 626 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 HHIPL1Q96JK4 782 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 RBP7Q96R05 134 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 TMED9Q9BVK6 235 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 EBF3Q9H4W6 596 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 NSUN3Q9H649 340 aaKnown RBP8.44□□□□□ -1.06
HPS4-209ENST00000466781 LEFTY2O00292 366 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 SOX1O00570 391 aaPredicted RBP8.44□□□□□ -1.06
HPS4-209ENST00000466781 DUX1O43812 170 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 ECI2O75521 394 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 OAS1P00973 400 aaKnown RBP8.44□□□□□ -1.06
HPS4-209ENST00000466781 C8orf89P0DMQ9 161 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 MAPK3P27361 379 aaPredicted RBP8.44□□□□□ -1.06
HPS4-209ENST00000466781 BDH1Q02338 343 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 MLLT1Q03111 559 aaPredicted RBP8.44□□□□□ -1.06
HPS4-209ENST00000466781 TIGD6Q17RP2 521 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 ZNF100Q8IYN0 542 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 ALG3Q92685 438 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 TFGQ92734 400 aaPredicted RBP8.44□□□□□ -1.06
HPS4-209ENST00000466781 MMABQ96EY8 250 aaPredicted RBP8.44□□□□□ -1.06
HPS4-209ENST00000466781 OR10A4Q9H209 315 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 MINDY3Q9H8M7 445 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 TIMMDC1Q9NPL8 285 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 PCDH10Q9P2E7 1040 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 MYH3P11055 1940 aa8.44□□□□□ -1.06
HPS4-209ENST00000466781 MATN2O00339 956 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 OAZ2O95190 189 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 POLR2CP19387 275 aaPredicted RBP8.43□□□□□ -1.06
HPS4-209ENST00000466781 NR0B1P51843 470 aaKnown RBP8.43□□□□□ -1.06
HPS4-209ENST00000466781 IRF9Q00978 393 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 C22orf39Q6P5X5 142 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 LGI4Q8N135 537 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 OR8H3Q8N146 312 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 MINDY2Q8NBR6 621 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 THAP6Q8TBB0 222 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 OTUB2Q96DC9 234 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 SLC7A11Q9UPY5 501 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 TMED5Q9Y3A6 229 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 ADAM18Q9Y3Q7 739 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 OR51F1A6NGY5 319 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 PIGRP01833 764 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 HOXB9P17482 250 aaPredicted RBP8.43□□□□□ -1.06
HPS4-209ENST00000466781 PFKLP17858 780 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 SHMT2P34897 504 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 SOWAHAQ2M3V2 549 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 RALGPS1Q5JS13 557 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 FRG2Q64ET8 278 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 TMEM225Q6GV28 225 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 UNQ6126/PRO20091Q6UXV3 157 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 ZNF598Q86UK7 904 aaKnown RBP8.43□□□□□ -1.06
HPS4-209ENST00000466781 TMEM234Q8WY98 164 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 FRG2BQ96QU4 278 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 TMEM209Q96SK2 561 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 CD180Q99467 661 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 P2RY13Q9BPV8 354 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 TMEM168Q9H0V1 697 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 TRNAU1APQ9NX07 287 aaKnown RBP8.43□□□□□ -1.06
HPS4-209ENST00000466781 SCML2Q9UQR0 700 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 SLC22A14Q9Y267 594 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 MYH13Q9UKX3 1938 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 M0R2N6 131 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 SLC22A2O15244 555 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 KDELR3O43731 214 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 CLDN7O95471 211 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 CPNE6O95741 557 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 HAPLN1P10915 354 aaPredicted RBP8.43□□□□□ -1.06
HPS4-209ENST00000466781 CBLP22681 906 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 JAM2P57087 298 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 OR2B6P58173 313 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 PON3Q15166 354 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 ODF4Q2M2E3 257 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 MFSD5Q6N075 450 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 TMEM214Q6NUQ4 689 aaKnown RBP8.43□□□□□ -1.06
HPS4-209ENST00000466781 SERINC5Q86VE9 423 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 DCUN1D3Q8IWE4 304 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 SNIP1Q8TAD8 396 aaKnown RBP8.43□□□□□ -1.06
HPS4-209ENST00000466781 C9orf43Q8TAL5 461 aaPredicted RBP8.43□□□□□ -1.06
HPS4-209ENST00000466781 FANK1Q8TC84 345 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 NAA11Q9BSU3 229 aaPredicted RBP8.43□□□□□ -1.06
HPS4-209ENST00000466781 SLC29A3Q9BZD2 475 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 IRF2BPLQ9H1B7 796 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 ETAA1Q9NY74 926 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 PPP4R1LQ9P1A2 415 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 PRODH2Q9UF12 536 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 PCDHB14Q9Y5E9 798 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 WASF2Q9Y6W5 498 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 CLDN25C9JDP6 229 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 H3BSH0 61 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 FAM163BP0C2L3 166 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 KCNE1P15382 129 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 IMPDH1P20839 514 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 ARL9Q6T311 187 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 ARSKQ6UWY0 536 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 LIX1LQ8IVB5 337 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 TMEM151BQ8IW70 566 aa8.43□□□□□ -1.06
HPS4-209ENST00000466781 LAS2Q8IYD9 372 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms