RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 NTRK1P04629 796 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 SERPINE1P05121 402 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 HBQ1P09105 142 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 PTPN4P29074 926 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 SKP1P63208 163 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 CSNK1G2P78368 415 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 ZNF33BQ06732 778 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 E2F2Q14209 437 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 UGT8Q16880 541 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 GGTA1PQ4G0N0 100 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 UNC50Q53HI1 259 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 YOD1Q5VVQ6 348 aaPredicted RBP16.63■□□□□ 0.25
CPSF4-209ENST00000465132 FCRL6Q6DN72 434 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 GRHL2Q6ISB3 625 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 NIPAL1Q6NVV3 410 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 MED27Q6P2C8 311 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 FAM199XQ6PEV8 388 aaPredicted RBP16.63■□□□□ 0.25
CPSF4-209ENST00000465132 FRMD7Q6ZUT3 714 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 RNF44Q7L0R7 432 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 DNAJC22Q8N4W6 341 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 CAMKVQ8NCB2 501 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 PSMG3-AS1Q96PY0 264 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 ZNF382Q96SR6 550 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 TRIM55Q9BYV6 548 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 FGF21Q9NSA1 209 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 INTS9Q9NV88 658 aaKnown RBP16.63■□□□□ 0.25
CPSF4-209ENST00000465132 IRAK4Q9NWZ3 460 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 SNX6Q9UNH7 406 aa16.63■□□□□ 0.25
CPSF4-209ENST00000465132 SNRNP200O75643 2136 aaKnown RBP16.63■□□□□ 0.25
CPSF4-209ENST00000465132 SPENQ96T58 3664 aaKnown RBP16.63■□□□□ 0.25
CPSF4-209ENST00000465132 OR1F1O43749 312 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 WFS1O76024 890 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 CHEK2O96017 543 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 SLC35G6P0C7Q6 338 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 PVRP15151 417 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 ITGA1P56199 1179 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 RPS18P62269 152 aaKnown RBP16.62■□□□□ 0.25
CPSF4-209ENST00000465132 REEP5Q00765 189 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 DOC2AQ14183 400 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 RCN2Q14257 317 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 RBBP5Q15291 538 aaKnown RBP16.62■□□□□ 0.25
CPSF4-209ENST00000465132 FAM214AQ32MH5 1076 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 FBXO48Q5FWF7 155 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 TTC19Q6DKK2 380 aaPredicted RBP16.62■□□□□ 0.25
CPSF4-209ENST00000465132 TLDC1Q6P9B6 456 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 GPRIN3Q6ZVF9 776 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 MCATQ8IVS2 390 aaKnown RBP16.62■□□□□ 0.25
CPSF4-209ENST00000465132 L3MBTL4Q8NA19 623 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 TTC29Q8NA56 475 aaPredicted RBP16.62■□□□□ 0.25
CPSF4-209ENST00000465132 MFSD9Q8NBP5 474 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 MGARPQ8TDB4 240 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 TRPC4APQ8TEL6 797 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 THAP4Q8WY91 577 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 CENPKQ9BS16 269 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 SLC29A3Q9BZD2 475 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 C12orf65Q9H3J6 166 aaKnown RBP16.62■□□□□ 0.25
CPSF4-209ENST00000465132 CUEDC1Q9NWM3 386 aaPredicted RBP16.62■□□□□ 0.25
CPSF4-209ENST00000465132 NMRK1Q9NWW6 199 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 TRPS1Q9UHF7 1281 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 ZFP69BQ9UJL9 534 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 TSC22D4Q9Y3Q8 395 aa16.62■□□□□ 0.25
CPSF4-209ENST00000465132 H0YIV9 168 aa16.61■□□□□ 0.25
CPSF4-209ENST00000465132 ZSCAN9O15535 394 aaPredicted RBP16.61■□□□□ 0.25
CPSF4-209ENST00000465132 CPNE3O75131 537 aaKnown RBP16.61■□□□□ 0.25
CPSF4-209ENST00000465132 ESRRBO95718 433 aa16.61■□□□□ 0.25
CPSF4-209ENST00000465132 KRT6AP02538 564 aa16.61■□□□□ 0.25
CPSF4-209ENST00000465132 KRT6BP04259 564 aa16.61■□□□□ 0.25
CPSF4-209ENST00000465132 KRT6CP48668 564 aa16.61■□□□□ 0.25
CPSF4-209ENST00000465132 ARSFP54793 590 aa16.61■□□□□ 0.25
CPSF4-209ENST00000465132 EMP3P54852 163 aa16.61■□□□□ 0.25
CPSF4-209ENST00000465132 RPS15P62841 145 aaKnown RBP16.61■□□□□ 0.25
CPSF4-209ENST00000465132 RGS1Q08116 209 aa16.61■□□□□ 0.25
CPSF4-209ENST00000465132 IFT88Q13099 833 aa16.61■□□□□ 0.25
CPSF4-209ENST00000465132 PWP1Q13610 501 aa16.61■□□□□ 0.25
CPSF4-209ENST00000465132 SLBPQ14493 270 aaKnown RBP eCLIP16.61■□□□□ 0.25
CPSF4-209ENST00000465132 GRM7Q14831 915 aa16.61■□□□□ 0.25
CPSF4-209ENST00000465132 NDUFA9Q16795 377 aa16.61■□□□□ 0.25
CPSF4-209ENST00000465132 CATSPEREQ5SY80 951 aa16.61■□□□□ 0.25
CPSF4-209ENST00000465132 SYVN1Q86TM6 617 aa16.61■□□□□ 0.25
CPSF4-209ENST00000465132 GATA5Q9BWX5 397 aaPredicted RBP16.61■□□□□ 0.25
CPSF4-209ENST00000465132 SLC7A5P2Q9GIP4 190 aa16.61■□□□□ 0.25
CPSF4-209ENST00000465132 KLHL25Q9H0H3 589 aa16.61■□□□□ 0.25
CPSF4-209ENST00000465132 MID1IP1Q9NPA3 183 aa16.61■□□□□ 0.25
CPSF4-209ENST00000465132 SRPK3Q9UPE1 567 aa16.61■□□□□ 0.25
CPSF4-209ENST00000465132 IGKV1-8A0A0C4DH67 115 aa16.6■□□□□ 0.25
CPSF4-209ENST00000465132 A0A0J9YVX5 310 aa16.6■□□□□ 0.25
CPSF4-209ENST00000465132 WDR91A4D1P6 747 aa16.6■□□□□ 0.25
CPSF4-209ENST00000465132 BLACEA4D250 179 aa16.6■□□□□ 0.25
CPSF4-209ENST00000465132 TMEM150CB9EJG8 249 aa16.6■□□□□ 0.25
CPSF4-209ENST00000465132 HAT1O14929 419 aa16.6■□□□□ 0.25
CPSF4-209ENST00000465132 SCRG1O75711 98 aa16.6■□□□□ 0.25
CPSF4-209ENST00000465132 OR2B3O76000 313 aa16.6■□□□□ 0.25
CPSF4-209ENST00000465132 HSPA4LO95757 839 aa16.6■□□□□ 0.25
CPSF4-209ENST00000465132 HMOX2P30519 316 aa16.6■□□□□ 0.25
CPSF4-209ENST00000465132 CDH13P55290 713 aa16.6■□□□□ 0.25
CPSF4-209ENST00000465132 TGM3Q08188 693 aa16.6■□□□□ 0.25
CPSF4-209ENST00000465132 STX3Q13277 289 aa16.6■□□□□ 0.25
CPSF4-209ENST00000465132 IL10RAQ13651 578 aa16.6■□□□□ 0.25
CPSF4-209ENST00000465132 MPP2Q14168 576 aa16.6■□□□□ 0.25
CPSF4-209ENST00000465132 GPR19Q15760 415 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms