RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 FRMD6Q96NE9 622 aa21.39■■□□□ 1.02
USP42-205ENST00000465073 TINAGQ9UJW2 476 aa21.39■■□□□ 1.02
USP42-205ENST00000465073 OTOGQ6ZRI0 2925 aa21.39■■□□□ 1.01
USP42-205ENST00000465073 GOLGA6L10A0A0M3HER8 536 aa21.39■■□□□ 1.01
USP42-205ENST00000465073 NPIPA5E9PKD4 350 aa21.39■■□□□ 1.01
USP42-205ENST00000465073 NDC80O14777 642 aa21.39■■□□□ 1.01
USP42-205ENST00000465073 COX6B1P14854 86 aa21.39■■□□□ 1.01
USP42-205ENST00000465073 ADORA2A-AS1P86434 159 aa21.39■■□□□ 1.01
USP42-205ENST00000465073 MEF2AQ02078 507 aaPredicted RBP21.39■■□□□ 1.01
USP42-205ENST00000465073 RGS1Q08116 209 aa21.39■■□□□ 1.01
USP42-205ENST00000465073 PPP1R7Q15435 360 aa21.39■■□□□ 1.01
USP42-205ENST00000465073 SLC25A25Q6KCM7 469 aa21.39■■□□□ 1.01
USP42-205ENST00000465073 RPS19BP1Q86WX3 136 aaKnown RBP21.39■■□□□ 1.01
USP42-205ENST00000465073 NT5CQ8TCD5 201 aa21.39■■□□□ 1.01
USP42-205ENST00000465073 ELP5Q8TE02 316 aa21.39■■□□□ 1.01
USP42-205ENST00000465073 PHF12Q96QT6 1004 aa21.39■■□□□ 1.01
USP42-205ENST00000465073 OR4K3Q96R72 315 aa21.39■■□□□ 1.01
USP42-205ENST00000465073 CDCP1Q9H5V8 836 aa21.39■■□□□ 1.01
USP42-205ENST00000465073 CLK4Q9HAZ1 481 aaKnown RBP21.39■■□□□ 1.01
USP42-205ENST00000465073 LRFN1Q9P244 771 aa21.39■■□□□ 1.01
USP42-205ENST00000465073 NPIPA1Q9UND3 350 aa21.39■■□□□ 1.01
USP42-205ENST00000465073 PCNX1Q96RV3 2341 aa21.38■■□□□ 1.01
USP42-205ENST00000465073 NEURL1O76050 574 aa21.38■■□□□ 1.01
USP42-205ENST00000465073 SERPIND1P05546 499 aa21.38■■□□□ 1.01
USP42-205ENST00000465073 ST13P50502 369 aaKnown RBP21.38■■□□□ 1.01
USP42-205ENST00000465073 PDAP1Q13442 181 aaKnown RBP21.38■■□□□ 1.01
USP42-205ENST00000465073 CSHL1Q14406 222 aa21.38■■□□□ 1.01
USP42-205ENST00000465073 ABHD13Q7L211 337 aa21.38■■□□□ 1.01
USP42-205ENST00000465073 GALNTL5Q7Z4T8 443 aa21.38■■□□□ 1.01
USP42-205ENST00000465073 ACTRT1Q8TDG2 376 aa21.38■■□□□ 1.01
USP42-205ENST00000465073 ADAMTS18Q8TE60 1221 aa21.38■■□□□ 1.01
USP42-205ENST00000465073 TSPAN10Q9H1Z9 355 aaPredicted RBP21.38■■□□□ 1.01
USP42-205ENST00000465073 ZFP69BQ9UJL9 534 aa21.38■■□□□ 1.01
USP42-205ENST00000465073 FBN2P35556 2912 aa21.37■■□□□ 1.01
USP42-205ENST00000465073 PKDREJQ9NTG1 2253 aa21.37■■□□□ 1.01
USP42-205ENST00000465073 ASNA1O43681 348 aa21.37■■□□□ 1.01
USP42-205ENST00000465073 DNAJB6O75190 326 aa21.37■■□□□ 1.01
USP42-205ENST00000465073 AHRP35869 848 aa21.37■■□□□ 1.01
USP42-205ENST00000465073 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.37■■□□□ 1.01
USP42-205ENST00000465073 SIAH3Q8IW03 269 aa21.37■■□□□ 1.01
USP42-205ENST00000465073 CORO1CQ9ULV4 474 aaPredicted RBP21.37■■□□□ 1.01
USP42-205ENST00000465073 MEMO1Q9Y316 297 aa21.37■■□□□ 1.01
USP42-205ENST00000465073 VWA7Q9Y334 891 aa21.37■■□□□ 1.01
USP42-205ENST00000465073 PRMT3O60678 531 aa21.36■■□□□ 1.01
USP42-205ENST00000465073 B4GALT2O60909 372 aa21.36■■□□□ 1.01
USP42-205ENST00000465073 ENO2P09104 434 aaPredicted RBP21.36■■□□□ 1.01
USP42-205ENST00000465073 ZNF888P0CJ79 500 aaPredicted RBP21.36■■□□□ 1.01
USP42-205ENST00000465073 SCTRP47872 440 aa21.36■■□□□ 1.01
USP42-205ENST00000465073 OLR1P78380 273 aa21.36■■□□□ 1.01
USP42-205ENST00000465073 MAPKAPK3Q16644 382 aa21.36■■□□□ 1.01
USP42-205ENST00000465073 CATSPEREQ5SY80 951 aa21.36■■□□□ 1.01
USP42-205ENST00000465073 QSOX2Q6ZRP7 698 aa21.36■■□□□ 1.01
USP42-205ENST00000465073 CYP4X1Q8N118 509 aa21.36■■□□□ 1.01
USP42-205ENST00000465073 GPATCH11Q8N954 259 aa21.36■■□□□ 1.01
USP42-205ENST00000465073 SLC5A11Q8WWX8 675 aa21.36■■□□□ 1.01
USP42-205ENST00000465073 NEIL2Q969S2 332 aa21.36■■□□□ 1.01
USP42-205ENST00000465073 CERS2Q96G23 380 aa21.36■■□□□ 1.01
USP42-205ENST00000465073 PTCHD1Q96NR3 888 aa21.36■■□□□ 1.01
USP42-205ENST00000465073 GPAMQ9HCL2 828 aa21.36■■□□□ 1.01
USP42-205ENST00000465073 TEP1Q99973 2627 aaKnown RBP21.35■■□□□ 1.01
USP42-205ENST00000465073 URADA6NGE7 173 aa21.35■■□□□ 1.01
USP42-205ENST00000465073 DNALI1O14645 258 aaPredicted RBP21.35■■□□□ 1.01
USP42-205ENST00000465073 BANF1O75531 89 aa21.35■■□□□ 1.01
USP42-205ENST00000465073 SLC25A12O75746 678 aa21.35■■□□□ 1.01
USP42-205ENST00000465073 SNRPB2P08579 225 aaKnown RBP21.35■■□□□ 1.01
USP42-205ENST00000465073 MSS51Q4VC12 460 aa21.35■■□□□ 1.01
USP42-205ENST00000465073 TEDDM1Q5T9Z0 273 aa21.35■■□□□ 1.01
USP42-205ENST00000465073 HECTD2Q5U5R9 776 aa21.35■■□□□ 1.01
USP42-205ENST00000465073 GHDCQ8N2G8 530 aa21.35■■□□□ 1.01
USP42-205ENST00000465073 KIF2BQ8N4N8 673 aa21.35■■□□□ 1.01
USP42-205ENST00000465073 UTP15Q8TED0 518 aaKnown RBP21.35■■□□□ 1.01
USP42-205ENST00000465073 PDLIM5Q96HC4 596 aaKnown RBP21.35■■□□□ 1.01
USP42-205ENST00000465073 OSBPL9Q96SU4 736 aa21.35■■□□□ 1.01
USP42-205ENST00000465073 OLFM1Q99784 485 aa21.35■■□□□ 1.01
USP42-205ENST00000465073 TRIM45Q9H8W5 580 aaPredicted RBP21.35■■□□□ 1.01
USP42-205ENST00000465073 PPANQ9NQ55 473 aaKnown RBP21.35■■□□□ 1.01
USP42-205ENST00000465073 ASIC3Q9UHC3 531 aa21.35■■□□□ 1.01
USP42-205ENST00000465073 CSMD1Q96PZ7 3565 aa21.35■■□□□ 1.01
USP42-205ENST00000465073 NME2P1O60361 137 aa21.34■■□□□ 1.01
USP42-205ENST00000465073 GUCA1CO95843 209 aa21.34■■□□□ 1.01
USP42-205ENST00000465073 B3GALT4O96024 378 aa21.34■■□□□ 1.01
USP42-205ENST00000465073 NME2P22392 152 aa21.34■■□□□ 1.01
USP42-205ENST00000465073 TPP2P29144 1249 aaPredicted RBP21.34■■□□□ 1.01
USP42-205ENST00000465073 CYB561P49447 251 aa21.34■■□□□ 1.01
USP42-205ENST00000465073 ZNF468Q5VIY5 522 aaPredicted RBP21.34■■□□□ 1.01
USP42-205ENST00000465073 IGDCC3Q8IVU1 814 aa21.34■■□□□ 1.01
USP42-205ENST00000465073 TRPV3Q8NET8 790 aa21.34■■□□□ 1.01
USP42-205ENST00000465073 TRIM51Q9BSJ1 452 aa21.34■■□□□ 1.01
USP42-205ENST00000465073 PDZD2O15018 2839 aa21.34■■□□□ 1.01
USP42-205ENST00000465073 RNH1P13489 461 aaKnown RBP21.33■■□□□ 1.01
USP42-205ENST00000465073 ABOP16442 354 aa21.33■■□□□ 1.01
USP42-205ENST00000465073 MLF1P58340 268 aa21.33■■□□□ 1.01
USP42-205ENST00000465073 BTG2P78543 158 aa21.33■■□□□ 1.01
USP42-205ENST00000465073 BBS9Q3SYG4 887 aa21.33■■□□□ 1.01
USP42-205ENST00000465073 FAM45BPQ6NSW5 357 aa21.33■■□□□ 1.01
USP42-205ENST00000465073 FAM45AQ8TCE6 357 aa21.33■■□□□ 1.01
USP42-205ENST00000465073 MTFMTQ96DP5 389 aaKnown RBP21.33■■□□□ 1.01
USP42-205ENST00000465073 LURAP1Q96LR2 239 aa21.33■■□□□ 1.01
USP42-205ENST00000465073 TSNARE1Q96NA8 513 aa21.33■■□□□ 1.01
USP42-205ENST00000465073 AIF1LQ9BQI0 150 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms