RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 MAGEC1O60732 1142 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 NME6O75414 186 aaPredicted RBP3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 SAP30O75446 220 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 MT-ND2P03891 347 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 SBK2P0C263 348 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 CFC1BP0CG36 223 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 CFC1P0CG37 223 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 VCLP18206 1134 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 CTNNA2P26232 953 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 SERPINB6P35237 376 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 SLC1A3P43003 542 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 MAGEB1P43366 347 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 SLC6A12P48065 614 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 XGP55808 180 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 CSNK2BP67870 215 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 ARF5P84085 180 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 SLC34A1Q06495 639 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 GRB14Q14449 540 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 DUSP5Q16690 384 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 SLC39A12Q504Y0 691 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 WLSQ5T9L3 541 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 BSPRYQ5W0U4 402 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 CHMP1BQ7LBR1 199 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 TDHQ8IZJ6 230 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 CCDC185Q8N715 623 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 RNF149Q8NC42 400 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 HCAR2Q8TDS4 363 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 CASP10Q92851 521 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 NXPE2Q96DL1 559 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 OMA1Q96E52 524 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 ZNF486Q96H40 463 aaPredicted RBP3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 NEDD4LQ96PU5 975 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 USP28Q96RU2 1077 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 IL12RB2Q99665 862 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 ZNF559Q9BR84 538 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 DGCR6LQ9BY27 220 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 MRPL17Q9NRX2 175 aaKnown RBP3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 PLCXD1Q9NUJ7 323 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 KLHL8Q9P2G9 620 aaPredicted RBP3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 PYGO1Q9Y3Y4 419 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 ANGPTL3Q9Y5C1 460 aa3.2□□□□□ -1.9
HMGXB4-205ENST00000464480 RNF123Q5XPI4 1314 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 MAGEB16A2A368 324 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 CCDC162PA2VCL2 907 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 SMIM30A4D0T7 59 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 TRIM64A6NGJ6 449 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 TRIM64BA6NI03 449 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 M0R296 226 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 NR5A2O00482 541 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 SURF4O15260 269 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 PNPP00491 289 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 IGHEP01854 428 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 CPA3P15088 417 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 ZNF26P17031 533 aaPredicted RBP3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 MT3P25713 68 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 SRD5A2P31213 254 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 DEKP35659 375 aaKnown RBP3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 MMP12P39900 470 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 SOX3P41225 446 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 NME5P56597 212 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 KIAA1024LP59773 190 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 FKBP1BP68106 108 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 PMP22Q01453 160 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 TRA2AQ13595 282 aaKnown RBP eCLIP3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 MAPK11Q15759 364 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 FAM106AQ4KMX7 169 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 PRAMEF8Q5VWM4 474 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 TCEAL6Q6IPX3 200 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 SLC27A4Q6P1M0 643 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 SIGLEC15Q6ZMC9 328 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 NOTCH2NLQ7Z3S9 236 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 TRMT11Q7Z4G4 463 aaKnown RBP3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 ZER1Q7Z7L7 766 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 TEX26Q8N6G2 289 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 ADAD2Q8NCV1 583 aaKnown RBP3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 SEPT8Q92599 483 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 KRT35Q92764 455 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 BCL2L2Q92843 193 aaPredicted RBP3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 CFAP36Q96G28 342 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 CABS1Q96KC9 395 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 LURAP1Q96LR2 239 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 C2orf48Q96LS8 159 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 PCDHB18PQ96TA0 734 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 SYT15Q9BQS2 421 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 LRRC2Q9BYS8 371 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 HOXD1Q9GZZ0 328 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 MTHFD2LQ9H903 347 aaPredicted RBP3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 MID1IP1Q9NPA3 183 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 PNPLA3Q9NST1 481 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 DBF4Q9UBU7 674 aaPredicted RBP3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 CACNG5Q9UF02 275 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 LNPEPQ9UIQ6 1025 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 POMT2Q9UKY4 750 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 SNX5Q9Y5X3 404 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 CSNK1G3Q9Y6M4 447 aa3.19□□□□□ -1.9
HMGXB4-205ENST00000464480 A0A0A6YYC8 382 aaPredicted RBP3.18□□□□□ -1.9
HMGXB4-205ENST00000464480 hCG_38984A0A1B0GV85 526 aa3.18□□□□□ -1.9
HMGXB4-205ENST00000464480 ZNF732B4DXR9 585 aa3.18□□□□□ -1.9
HMGXB4-205ENST00000464480 I3L1I5 382 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms