RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 EXOC3L2Q2M3D2 409 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 ZDHHC20Q5W0Z9 365 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 BEND5Q7L4P6 421 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 TAS1R1Q7RTX1 841 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 NDNFQ8TB73 568 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 ZNF675Q8TD23 568 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 EFCAB11Q9BUY7 163 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 LMAN2LQ9H0V9 348 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 TRIT1Q9H3H1 467 aaKnown RBP8.76□□□□□ -1.01
HPS4-208ENST00000464362 TLR9Q9NR96 1032 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 TBC1D14Q9P2M4 693 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 IL20RAQ9UHF4 553 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 IKZF2Q9UKS7 526 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 POLR1DQ9Y2S0 133 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 Q9Y3F1 56 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 FUOMA2VDF0 154 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 OR6C70A6NIJ9 312 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 CHURC1-FNTBB4DL54 471 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 SCN2BO60939 215 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 SLC16A8O95907 504 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 RLN1P04808 185 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 RPS17P08708 135 aaKnown RBP8.76□□□□□ -1.01
HPS4-208ENST00000464362 ATXN1LP0C7T5 689 aaKnown RBP8.76□□□□□ -1.01
HPS4-208ENST00000464362 TIE1P35590 1138 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 CLCN2P51788 898 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 CSTF1Q05048 431 aaKnown RBP8.76□□□□□ -1.01
HPS4-208ENST00000464362 ARL9Q6T311 187 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 CXXC5Q7LFL8 322 aaKnown RBP8.76□□□□□ -1.01
HPS4-208ENST00000464362 ZNF438Q7Z4V0 828 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 OR9Q2Q8NGE9 314 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 GEMIN6Q8WXD5 167 aaKnown RBP8.76□□□□□ -1.01
HPS4-208ENST00000464362 FCGR1BQ92637 280 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 C17orf62Q9BQA9 187 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 PHPT1Q9NRX4 125 aaPredicted RBP8.76□□□□□ -1.01
HPS4-208ENST00000464362 FAM120CQ9NX05 1096 aaKnown RBP8.76□□□□□ -1.01
HPS4-208ENST00000464362 SOHLH2Q9NX45 425 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 POFUT2Q9Y2G5 429 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 A0A096LPI6 279 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 FAM172BPA6NC97 362 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 TNFRSF10BO14763 440 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 CPNE3O75131 537 aaKnown RBP8.76□□□□□ -1.01
HPS4-208ENST00000464362 OAZ2O95190 189 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 TCEA1P23193 301 aaKnown RBP8.76□□□□□ -1.01
HPS4-208ENST00000464362 ACRV1P26436 265 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 ITPKBP27987 946 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 C21orf33P30042 268 aaPredicted RBP8.76□□□□□ -1.01
HPS4-208ENST00000464362 RCVRNP35243 200 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 GALNT1Q10472 559 aaPredicted RBP8.76□□□□□ -1.01
HPS4-208ENST00000464362 GNA13Q14344 377 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 TYSND1Q2T9J0 566 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 NDUFAF6Q330K2 333 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 SLC36A3Q495N2 470 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 RAB41Q5JT25 222 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 OTUD1Q5VV17 481 aaPredicted RBP8.76□□□□□ -1.01
HPS4-208ENST00000464362 SYCE2Q6PIF2 218 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 NCCRP1Q6ZVX7 275 aaPredicted RBP8.76□□□□□ -1.01
HPS4-208ENST00000464362 MARCH9Q86YJ5 346 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 SPARTQ8N0X7 666 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 SLC5A8Q8N695 610 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 SUN5Q8TC36 379 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 ZFP90Q8TF47 636 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 KLHL6Q8WZ60 621 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 DPF3Q92784 378 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 POP5Q969H6 163 aaKnown RBP8.76□□□□□ -1.01
HPS4-208ENST00000464362 MGLLQ99685 303 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 ASPNQ9BXN1 380 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 ANKRA2Q9H9E1 313 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 PRSS21Q9Y6M0 314 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 CLCA3PQ9Y6N3 262 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 SPAG17Q6Q759 2223 aa8.76□□□□□ -1.01
HPS4-208ENST00000464362 A0A1W2PQ45 241 aaPredicted RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 A0A1W2PQY0 241 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 NPIPB15A6NHN6 443 aaPredicted RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 LATO43561 262 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 NPPAP01160 153 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 RB1P06400 928 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 MATN1P21941 496 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 IDSP22304 550 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 PHC1P78364 1004 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 RGS1Q08116 209 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 TUBA3CQ13748 450 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 TEAD2Q15562 447 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 C11orf91Q3C1V1 193 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 ATG9BQ674R7 924 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 HSDL2Q6YN16 418 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 RFLNAQ6ZTI6 216 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 ZNF551Q7Z340 670 aaPredicted RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 IGFN1Q86VF2 1251 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 FAM86B1Q8N7N1 296 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 LCN9Q8WX39 176 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 JPH3Q8WXH2 748 aaPredicted RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 RERGQ96A58 199 aaPredicted RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 ELAC1Q9H777 363 aaKnown RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 CXXC1Q9P0U4 656 aaPredicted RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 PGAP2Q9UHJ9 254 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 CNOT11Q9UKZ1 510 aaKnown RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 PHF24Q9UPV7 400 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 OARD1Q9Y530 152 aa8.75□□□□□ -1.01
HPS4-208ENST00000464362 PTPRZ1P23471 2315 aaPredicted RBP8.75□□□□□ -1.01
HPS4-208ENST00000464362 BTAF1O14981 1849 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms