RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 PRLHRP49683 370 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 MAZP56270 477 aaKnown RBP7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 CKAP4Q07065 602 aaKnown RBP7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 DMPKQ09013 629 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 ILF3Q12906 894 aaKnown RBP eCLIP7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 LAMB3Q13751 1172 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 NFE2L1Q14494 772 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 CLCA4Q14CN2 919 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 PTCHD3Q3KNS1 767 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 ARMC3Q5W041 872 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 KIAA0930Q6ICG6 404 aaPredicted RBP7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 IYDQ6PHW0 289 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 PACS1Q6VY07 963 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 CENPUQ71F23 418 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 MAATS1Q7Z4T9 603 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 MARCH9Q86YJ5 346 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 TRAPPC5Q8IUR0 188 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 ARL14Q8N4G2 192 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 ARL10Q8N8L6 244 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 GPR150Q8NGU9 434 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 LKAAEAR1Q8TD35 194 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 ART4Q93070 314 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 ULK4Q96C45 1275 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 LINC00615Q96LM1 132 aaPredicted RBP7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 COPS8Q99627 209 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 EBNA1BP2Q99848 306 aaKnown RBP7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 TIMM29Q9BSF4 260 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 GSDMCQ9BYG8 508 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 KRTAP4-11Q9BYQ6 195 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 P2RY12Q9H244 342 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 DPEP2Q9H4A9 486 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 KCNE5Q9UJ90 142 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 ANAPC5Q9UJX4 755 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 NDRG4Q9ULP0 352 aaKnown RBP7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 DNAJC16Q9Y2G8 782 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 TEX264Q9Y6I9 313 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 RNF215Q9Y6U7 377 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 COL27A1Q8IZC6 1860 aaPredicted RBP7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 RP1P56715 2156 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 LAMA5O15230 3695 aa7.78□□□□□ -1.16
ECHDC1-212ENST00000461239 MAGEB16A2A368 324 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 OR2W5A6NFC9 320 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 MGAT4DA6NG13 374 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 IQCF5A8MTL0 148 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 AHRRA9YTQ3 701 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 CD3EAPO15446 510 aaKnown RBP7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 ZNF500O60304 480 aaPredicted RBP7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 PRAMEF10O60809 474 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 USP1O94782 785 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 PPIFP30405 207 aaKnown RBP7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 AKT1P31749 480 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 PNLIPRP1P54315 467 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 DRG2P55039 364 aaKnown RBP7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 PRAMEP78395 509 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 TUBB2AQ13885 445 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 ITIH4Q14624 930 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 CRYMQ14894 314 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 TYSND1Q2T9J0 566 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 C14orf28Q4W4Y0 310 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 CTSL3PQ5NE16 218 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 UBAP2Q5T6F2 1119 aaKnown RBP7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 B3GNTL1Q67FW5 361 aaPredicted RBP7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 STEAP4Q687X5 459 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 CASC4Q6P4E1 433 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 ABRAXAS1Q6UWZ7 409 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 DHRS13Q6UX07 377 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 NAPRTQ6XQN6 538 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 EFL1Q7Z2Z2 1120 aaKnown RBP7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 GDF7Q7Z4P5 450 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 CLNKQ7Z7G1 428 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 DENND6AQ8IWF6 608 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 SFRP1Q8N474 314 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 CHCHD4Q8N4Q1 142 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 OR2L2Q8NH16 312 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 FBXO25Q8TCJ0 367 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 SLC37A2Q8TED4 501 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 ADAMTS14Q8WXS8 1223 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 STAMBPL1Q96FJ0 436 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 UBXN10Q96LJ8 280 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 BIRC8Q96P09 236 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 TUBB2BQ9BVA1 445 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 CARD6Q9BX69 1037 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 ZDHHC18Q9NUE0 388 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 ZNF624Q9P2J8 865 aaPredicted RBP7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 SLC17A6Q9P2U8 582 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 MTO1Q9Y2Z2 717 aaKnown RBP7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 PCDHGA1Q9Y5H4 931 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 MAD1L1Q9Y6D9 718 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 RPS6KL1Q9Y6S9 549 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 FAM169AQ9Y6X4 670 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 ZFHX4Q86UP3 3567 aa7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 ZFC3H1O60293 1989 aaKnown RBP7.77□□□□□ -1.17
ECHDC1-212ENST00000461239 A0A1W2PQM1 296 aa7.76□□□□□ -1.17
ECHDC1-212ENST00000461239 CPED1A4D0V7 1026 aa7.76□□□□□ -1.17
ECHDC1-212ENST00000461239 CTAGE15A4D2H0 777 aa7.76□□□□□ -1.17
ECHDC1-212ENST00000461239 DBX1A6NMT0 343 aa7.76□□□□□ -1.17
ECHDC1-212ENST00000461239 OR52A4PA6NMU1 304 aa7.76□□□□□ -1.17
ECHDC1-212ENST00000461239 MARCH11A6NNE9 402 aa7.76□□□□□ -1.17
ECHDC1-212ENST00000461239 NTN3O00634 580 aaPredicted RBP7.76□□□□□ -1.17
ECHDC1-212ENST00000461239 B4GAT1O43505 415 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms