RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 SLBPQ14493 270 aaKnown RBP eCLIP21.71■■□□□ 1.07
PTPN4-208ENST00000460289 PDK4Q16654 411 aa21.71■■□□□ 1.07
PTPN4-208ENST00000460289 FAM83EQ2M2I3 478 aa21.71■■□□□ 1.07
PTPN4-208ENST00000460289 ISLR2Q6UXK2 745 aa21.71■■□□□ 1.07
PTPN4-208ENST00000460289 SNX31Q8N9S9 440 aa21.71■■□□□ 1.07
PTPN4-208ENST00000460289 Q8NA96 180 aa21.71■■□□□ 1.07
PTPN4-208ENST00000460289 UTP15Q8TED0 518 aaKnown RBP21.71■■□□□ 1.07
PTPN4-208ENST00000460289 CREB3L4Q8TEY5 395 aa21.71■■□□□ 1.07
PTPN4-208ENST00000460289 EXT2Q93063 718 aa21.71■■□□□ 1.07
PTPN4-208ENST00000460289 ESAMQ96AP7 390 aa21.71■■□□□ 1.07
PTPN4-208ENST00000460289 PEX11GQ96HA9 241 aa21.71■■□□□ 1.07
PTPN4-208ENST00000460289 CD244Q9BZW8 370 aa21.71■■□□□ 1.07
PTPN4-208ENST00000460289 ILKAPQ9H0C8 392 aaPredicted RBP21.71■■□□□ 1.07
PTPN4-208ENST00000460289 IGSF5Q9NSI5 407 aa21.71■■□□□ 1.07
PTPN4-208ENST00000460289 COPG2Q9UBF2 871 aa21.71■■□□□ 1.07
PTPN4-208ENST00000460289 MYO18BQ8IUG5 2567 aa21.71■■□□□ 1.07
PTPN4-208ENST00000460289 ZNF860A6NHJ4 632 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 SYCE1LA8MT33 242 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 VPS4BO75351 444 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 ACSL3O95573 720 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 PRR35P0CG20 571 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 TYK2P29597 1187 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 HPDP32754 393 aaPredicted RBP21.7■■□□□ 1.06
PTPN4-208ENST00000460289 HNF4AP41235 474 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 AGTR2P50052 363 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 STXBP1P61764 594 aaKnown RBP21.7■■□□□ 1.06
PTPN4-208ENST00000460289 HYAL2Q12891 473 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 BMPR2Q13873 1038 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 PCOLCEQ15113 449 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 INPP5JQ15735 1006 aaPredicted RBP21.7■■□□□ 1.06
PTPN4-208ENST00000460289 FBXO48Q5FWF7 155 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 CRB2Q5IJ48 1285 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 Q6ZS92 163 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 CPEB2Q7Z5Q1 589 aaKnown RBP21.7■■□□□ 1.06
PTPN4-208ENST00000460289 IQCKQ8N0W5 287 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 PLPP5Q8NEB5 264 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 OR5T3Q8NGG3 340 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 RHEBL1Q8TAI7 183 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 PPP4R1Q8TF05 950 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 NXNL1Q96CM4 212 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 PTCD3Q96EY7 689 aaKnown RBP21.7■■□□□ 1.06
PTPN4-208ENST00000460289 ATOH8Q96SQ7 321 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 WDR77Q9BQA1 342 aaPredicted RBP21.7■■□□□ 1.06
PTPN4-208ENST00000460289 SNX15Q9NRS6 342 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 LUZP4Q9P127 313 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 VPS4AQ9UN37 437 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 IKBKGQ9Y6K9 419 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 SCN3AQ9NY46 2000 aa21.7■■□□□ 1.06
PTPN4-208ENST00000460289 UBR5O95071 2799 aaPredicted RBP21.7■■□□□ 1.06
PTPN4-208ENST00000460289 HMX2A2RU54 273 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 ANKDD1BA6NHY2 528 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 SUPT3HB4E1H0 165 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 CHST10O43529 356 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 CCNT2O60583 730 aaKnown RBP21.69■■□□□ 1.06
PTPN4-208ENST00000460289 SUPT3HO75486 399 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 WFS1O76024 890 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 SMIM10L1P0DMW3 83 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 JAK1P23458 1154 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 ECHS1P30084 290 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 GMPRP36959 345 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 EFNA3P52797 238 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 RAB8AP61006 207 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 MFAP5Q13361 173 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 LAPTM5Q13571 262 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 ACAP2Q15057 778 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 HIST2H2ACQ16777 129 aaPredicted RBP21.69■■□□□ 1.06
PTPN4-208ENST00000460289 XKR6Q5GH73 641 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 HIST2H2AA3Q6FI13 130 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 LRRC70Q7Z2Q7 622 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 DNAJB14Q8TBM8 379 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 TBC1D20Q96BZ9 403 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 WDR34Q96EX3 536 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 SMIM10Q96HG1 83 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 FAR2Q96K12 515 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 EFCAB11Q9BUY7 163 aa21.69■■□□□ 1.06
PTPN4-208ENST00000460289 A0A096LPK6 155 aa21.68■■□□□ 1.06
PTPN4-208ENST00000460289 CLEC3AO75596 197 aa21.68■■□□□ 1.06
PTPN4-208ENST00000460289 FHP07954 510 aa21.68■■□□□ 1.06
PTPN4-208ENST00000460289 INHBAP08476 426 aa21.68■■□□□ 1.06
PTPN4-208ENST00000460289 SERPINB8P50452 374 aa21.68■■□□□ 1.06
PTPN4-208ENST00000460289 NSDHLQ15738 373 aa21.68■■□□□ 1.06
PTPN4-208ENST00000460289 PAGE2BQ5JRK9 111 aa21.68■■□□□ 1.06
PTPN4-208ENST00000460289 TOR1AIP1Q5JTV8 583 aa21.68■■□□□ 1.06
PTPN4-208ENST00000460289 KLC3Q6P597 504 aa21.68■■□□□ 1.06
PTPN4-208ENST00000460289 LINC00696Q6ZRV3 163 aa21.68■■□□□ 1.06
PTPN4-208ENST00000460289 ANKRD37Q7Z713 158 aa21.68■■□□□ 1.06
PTPN4-208ENST00000460289 IFT20Q8IY31 132 aa21.68■■□□□ 1.06
PTPN4-208ENST00000460289 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.68■■□□□ 1.06
PTPN4-208ENST00000460289 CENPLQ8N0S6 344 aaPredicted RBP21.68■■□□□ 1.06
PTPN4-208ENST00000460289 SHISA5Q8N114 240 aa21.68■■□□□ 1.06
PTPN4-208ENST00000460289 GALNT11Q8NCW6 608 aa21.68■■□□□ 1.06
PTPN4-208ENST00000460289 KCTD4Q8WVF5 259 aa21.68■■□□□ 1.06
PTPN4-208ENST00000460289 SLC44A1Q8WWI5 657 aa21.68■■□□□ 1.06
PTPN4-208ENST00000460289 CCT6BQ92526 530 aa21.68■■□□□ 1.06
PTPN4-208ENST00000460289 IMMP1LQ96LU5 166 aa21.68■■□□□ 1.06
PTPN4-208ENST00000460289 KLHL31Q9H511 634 aa21.68■■□□□ 1.06
PTPN4-208ENST00000460289 LANCL2Q9NS86 450 aa21.68■■□□□ 1.06
PTPN4-208ENST00000460289 NBASA2RRP1 2371 aa21.67■■□□□ 1.06
PTPN4-208ENST00000460289 DOCK10Q96BY6 2186 aa21.67■■□□□ 1.06
PTPN4-208ENST00000460289 KLHL2O95198 593 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms