RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 LEFTY1O75610 366 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 MED26O95402 600 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 DLGAP3O95886 979 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 APOA1P02647 267 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 FTH1P02794 183 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 KRT8P05787 483 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 CSNK1DP48730 415 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 CLK3P49761 638 aaKnown RBP15.19■□□□□ 0.02
CMTM3-203ENST00000460097 GZMMP51124 257 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 LIMK1P53667 647 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 CHRNEQ04844 493 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 MAPK11Q15759 364 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 LRIF1Q5T3J3 769 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 AFTPHQ6ULP2 937 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 USP30Q70CQ3 517 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 CEP68Q76N32 757 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 KDELC2Q7Z4H8 507 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 HS3ST5Q8IZT8 346 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 FRMD1Q8N878 549 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 OR10A6Q8NH74 314 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 ZDHHC6Q9H6R6 413 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 CD93Q9NPY3 652 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 POLE4Q9NR33 117 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 NLE1Q9NVX2 485 aaPredicted RBP15.19■□□□□ 0.02
CMTM3-203ENST00000460097 EVLQ9UI08 416 aaPredicted RBP15.19■□□□□ 0.02
CMTM3-203ENST00000460097 SAMD4AQ9UPU9 718 aaKnown RBP15.19■□□□□ 0.02
CMTM3-203ENST00000460097 TRAPPC4Q9Y296 219 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 MAN2B2Q9Y2E5 1009 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 CCL27Q9Y4X3 112 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 ARIH1Q9Y4X5 557 aaPredicted RBP15.19■□□□□ 0.02
CMTM3-203ENST00000460097 MYO15AQ9UKN7 3530 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 IGHV1OR15-9A0A0B4J2B8 117 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 A0A1W2PP55 124 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 OR51F1A6NGY5 319 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 KPNA3O00505 521 aaPredicted RBP15.18■□□□□ 0.02
CMTM3-203ENST00000460097 IDH3BO43837 385 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 TSPAN12O95859 305 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 IGLV3-19P01714 112 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 GKP32189 559 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 TRPC1P48995 793 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 ERVPABLB-1P60509 514 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 MAPKAPK3Q16644 382 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 POM121L1PQ3SYA9 428 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 KIAA1614Q5VZ46 1190 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 ALG1LQ6GMV1 187 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 DESI1Q6ICB0 168 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 METTL2BQ6P1Q9 378 aaKnown RBP15.18■□□□□ 0.02
CMTM3-203ENST00000460097 C11orf74Q86VG3 221 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 CYP4Z1Q86W10 505 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 SPNS2Q8IVW8 549 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 MSRB3Q8IXL7 192 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 HDDC3Q8N4P3 179 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 FAM160A2Q8N612 972 aaPredicted RBP15.18■□□□□ 0.02
CMTM3-203ENST00000460097 ZNF540Q8NDQ6 660 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 HTRA1Q92743 480 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 THUMPD3Q9BV44 507 aaKnown RBP15.18■□□□□ 0.02
CMTM3-203ENST00000460097 CPEB1Q9BZB8 566 aaKnown RBP15.18■□□□□ 0.02
CMTM3-203ENST00000460097 DYRK4Q9NR20 520 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 C1orf109Q9NX04 203 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 GALPQ9UBC7 116 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 ZNF221Q9UK13 617 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 IKZF3Q9UKT9 509 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 GMPPBQ9Y5P6 360 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 AP1M2Q9Y6Q5 423 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 USP34Q70CQ2 3546 aa15.18■□□□□ 0.02
CMTM3-203ENST00000460097 MUC6Q6W4X9 2439 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 CDC7O00311 574 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 WNT9AO14904 365 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 INSIG1O15503 277 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 MAN1A2O60476 641 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 WDR47O94967 919 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 OR4F21O95013 312 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 FPR1P21462 350 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 DNAJA1P31689 397 aaKnown RBP15.17■□□□□ 0.02
CMTM3-203ENST00000460097 S100A5P33763 92 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 RGRP47804 291 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 CLK1P49759 484 aaKnown RBP15.17■□□□□ 0.02
CMTM3-203ENST00000460097 DSC2Q02487 901 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 ELP6Q0PNE2 266 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 SIM2Q14190 667 aaPredicted RBP15.17■□□□□ 0.02
CMTM3-203ENST00000460097 IHHQ14623 411 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 TTLL9Q3SXZ7 439 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 TPRG1LQ5T0D9 272 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 SLC36A4Q6YBV0 504 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 FAM124AQ86V42 546 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 GPSM1Q86YR5 675 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 METTL4Q8N3J2 472 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 PGBD5Q8N414 524 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 PAF1Q8N7H5 531 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 OR7G1Q8NGA0 311 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 OR6F1Q8NGZ6 308 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 PPP1R16AQ96I34 528 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 MGME1Q9BQP7 344 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 PCDH12Q9NPG4 1184 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 FAM86C1Q9NVL1 165 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 DKK3Q9UBP4 350 aa15.17■□□□□ 0.02
CMTM3-203ENST00000460097 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.17■□□□□ 0.02
CMTM3-203ENST00000460097 SLC28A1O00337 649 aa15.16■□□□□ 0.02
CMTM3-203ENST00000460097 TBX1O43435 398 aa15.16■□□□□ 0.02
CMTM3-203ENST00000460097 AIREO43918 545 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms