RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 LOC102723996A0A087X1L8 192 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 IGHV1-45A0A0A0MS14 117 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 ANKDD1BA6NHY2 528 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 PSMD12O00232 456 aaPredicted RBP16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 GALR3O60755 368 aaPredicted RBP16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 VPS4BO75351 444 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 RDH16O75452 317 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 ACSL3O95573 720 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 SERPINA7P05543 415 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 COX6A1P12074 109 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 CNTFP26441 200 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 TYK2P29597 1187 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 GDF5P43026 501 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 SERPINB9P50453 376 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 EEF1A2Q05639 463 aaKnown RBP16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 SLBPQ14493 270 aaKnown RBP eCLIP16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 EFTUD2Q15029 972 aaKnown RBP eCLIP16.56■□□□□ 0.24not detected■□□□□ 8.9
SCARNA2-201ENST00000458748 OR4D1Q15615 310 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 DEFB134Q4QY38 66 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 XKR6Q5GH73 641 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 CRB2Q5IJ48 1285 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 FAAH2Q6GMR7 532 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 TMEM205Q6UW68 189 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 ISLR2Q6UXK2 745 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 SLCO4C1Q6ZQN7 724 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 PRSS41Q7RTY9 318 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 IQCKQ8N0W5 287 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 GALNT11Q8NCW6 608 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 RHEBL1Q8TAI7 183 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 EXT2Q93063 718 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 UBE2E3Q969T4 207 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 PTCD3Q96EY7 689 aaKnown RBP16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 FUT8Q9BYC5 575 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 CD244Q9BZW8 370 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 ZNF700Q9H0M5 742 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 CDC42EP4Q9H3Q1 356 aaKnown RBP16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 SNX15Q9NRS6 342 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 PTBP2Q9UKA9 531 aaKnown RBP16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 VPS4AQ9UN37 437 aa16.56■□□□□ 0.24
SCARNA2-201ENST00000458748 RP1L1Q8IWN7 2480 aaPredicted RBP16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 SUPT3HB4E1H0 165 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 TAPBPO15533 448 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 CCNT2O60583 730 aaKnown RBP16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 SUPT3HO75486 399 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 KRT38O76015 456 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 WFS1O76024 890 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 ZNF888P0CJ79 500 aaPredicted RBP16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 HSPA7P48741 367 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 TGM3Q08188 693 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 ACAP2Q15057 778 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 IGFL2Q6UWQ7 119 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 ISCA2Q86U28 154 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 PDSS2Q86YH6 399 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 CNPY4Q8N129 248 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 ANKRD53Q8N9V6 530 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 Q8NA96 180 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 PPP4R1Q8TF05 950 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 CCT6BQ92526 530 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 TBC1D20Q96BZ9 403 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 LMF1Q96S06 567 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 WDR77Q9BQA1 342 aaPredicted RBP16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 TMEM79Q9BSE2 394 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 SLC29A3Q9BZD2 475 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 SLC6A16Q9GZN6 736 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 VN1R1Q9GZP7 353 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 SPNS1Q9H2V7 528 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 OPTCQ9UBM4 332 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 TEKT2Q9UIF3 430 aa16.55■□□□□ 0.24
SCARNA2-201ENST00000458748 A0A087WUV0 522 aaPredicted RBP16.54■□□□□ 0.24
SCARNA2-201ENST00000458748 A0A096LPK6 155 aa16.54■□□□□ 0.24
SCARNA2-201ENST00000458748 MASP2O00187 686 aa16.54■□□□□ 0.24
SCARNA2-201ENST00000458748 C2P06681 752 aa16.54■□□□□ 0.24
SCARNA2-201ENST00000458748 FHP07954 510 aa16.54■□□□□ 0.24
SCARNA2-201ENST00000458748 MSH2P43246 934 aa16.54■□□□□ 0.24
SCARNA2-201ENST00000458748 IRF8Q02556 426 aa16.54■□□□□ 0.24
SCARNA2-201ENST00000458748 BMPR2Q13873 1038 aa16.54■□□□□ 0.24
SCARNA2-201ENST00000458748 INPP5JQ15735 1006 aaPredicted RBP16.54■□□□□ 0.24
SCARNA2-201ENST00000458748 C18orf21Q32NC0 220 aaPredicted RBP16.54■□□□□ 0.24
SCARNA2-201ENST00000458748 PLEKHN1Q494U1 663 aaPredicted RBP16.54■□□□□ 0.24
SCARNA2-201ENST00000458748 LGSNQ5TDP6 509 aa16.54■□□□□ 0.24
SCARNA2-201ENST00000458748 CPEB2Q7Z5Q1 589 aaKnown RBP16.54■□□□□ 0.24
SCARNA2-201ENST00000458748 UTP15Q8TED0 518 aaKnown RBP16.54■□□□□ 0.24
SCARNA2-201ENST00000458748 GAL3ST3Q96A11 431 aa16.54■□□□□ 0.24
SCARNA2-201ENST00000458748 MOCOSQ96EN8 888 aa16.54■□□□□ 0.24
SCARNA2-201ENST00000458748 PEX11GQ96HA9 241 aa16.54■□□□□ 0.24
SCARNA2-201ENST00000458748 MAP10Q9P2G4 905 aa16.54■□□□□ 0.24
SCARNA2-201ENST00000458748 COPG2Q9UBF2 871 aa16.54■□□□□ 0.24
SCARNA2-201ENST00000458748 ANGPTL3Q9Y5C1 460 aa16.54■□□□□ 0.24
SCARNA2-201ENST00000458748 COL12A1Q99715 3063 aa16.54■□□□□ 0.24
SCARNA2-201ENST00000458748 SHANK1Q9Y566 2161 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 DYTNA2CJ06 578 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 CLEC18AA5D8T8 446 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 ZNF860A6NHJ4 632 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 MAGEB17A8MXT2 336 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 CHST10O43529 356 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 CLEC3AO75596 197 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 KLHL2O95198 593 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 PRR35P0CG20 571 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 MYBL2P10244 700 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 RNH1P13489 461 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms