RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 XCR1P46094 333 aa15.29■□□□□ 0.04
CD28-203ENST00000458610 VSNL1P62760 191 aa15.29■□□□□ 0.04
CD28-203ENST00000458610 PHEXP78562 749 aa15.29■□□□□ 0.04
CD28-203ENST00000458610 MAT1AQ00266 395 aaKnown RBP15.29■□□□□ 0.04
CD28-203ENST00000458610 AIMP2Q13155 320 aaKnown RBP15.29■□□□□ 0.04
CD28-203ENST00000458610 GTF2H2Q13888 395 aa15.29■□□□□ 0.04
CD28-203ENST00000458610 E2F2Q14209 437 aa15.29■□□□□ 0.04
CD28-203ENST00000458610 TUBB8Q3ZCM7 444 aa15.29■□□□□ 0.04
CD28-203ENST00000458610 DEFB134Q4QY38 66 aa15.29■□□□□ 0.04
CD28-203ENST00000458610 TOR1AIP1Q5JTV8 583 aa15.29■□□□□ 0.04
CD28-203ENST00000458610 GTF2H2CQ6P1K8 395 aa15.29■□□□□ 0.04
CD28-203ENST00000458610 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.29■□□□□ 0.04
CD28-203ENST00000458610 PTGR2Q8N8N7 351 aaPredicted RBP15.29■□□□□ 0.04
CD28-203ENST00000458610 UTP15Q8TED0 518 aaKnown RBP15.29■□□□□ 0.04
CD28-203ENST00000458610 GAL3ST3Q96A11 431 aa15.29■□□□□ 0.04
CD28-203ENST00000458610 MAGEB10Q96LZ2 347 aaPredicted RBP15.29■□□□□ 0.04
CD28-203ENST00000458610 ROGDIQ9GZN7 287 aa15.29■□□□□ 0.04
CD28-203ENST00000458610 IPPKQ9H8X2 491 aa15.29■□□□□ 0.04
CD28-203ENST00000458610 ACTR8Q9H981 624 aa15.29■□□□□ 0.04
CD28-203ENST00000458610 ZNF358Q9NW07 568 aa15.29■□□□□ 0.04
CD28-203ENST00000458610 C19orf25Q9UFG5 118 aaPredicted RBP15.29■□□□□ 0.04
CD28-203ENST00000458610 TBK1Q9UHD2 729 aa15.29■□□□□ 0.04
CD28-203ENST00000458610 MKL2Q9ULH7 1088 aa15.29■□□□□ 0.04
CD28-203ENST00000458610 ZNF490Q9ULM2 529 aaPredicted RBP15.29■□□□□ 0.04
CD28-203ENST00000458610 PCDHGA11Q9Y5H2 935 aa15.29■□□□□ 0.04
CD28-203ENST00000458610 HEMK1Q9Y5R4 338 aaPredicted RBP15.29■□□□□ 0.04
CD28-203ENST00000458610 HS3ST3B1Q9Y662 390 aa15.29■□□□□ 0.04
CD28-203ENST00000458610 MDC1Q14676 2089 aaKnown RBP15.28■□□□□ 0.04
CD28-203ENST00000458610 LRIT2A6NDA9 550 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 B8ZZF3 427 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 PSMD12O00232 456 aaPredicted RBP15.28■□□□□ 0.04
CD28-203ENST00000458610 CDH16O75309 829 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 CEACAM4O75871 244 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 ALPPP05187 535 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 EPORP19235 508 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 JAK1P23458 1154 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 HSD17B3P37058 310 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 CCT5P48643 541 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 PGDP52209 483 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 SOX8P57073 446 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 RAB8AP61006 207 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 AP2B1P63010 937 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 NFATC3Q12968 1075 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 CHAF1BQ13112 559 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 SYT16Q17RD7 645 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 MINDY4Q4G0A6 757 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 MFSD4BQ5TF39 518 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 GRHL2Q6ISB3 625 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 TRIM40Q6P9F5 258 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 KIRREL2Q6UWL6 708 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 CHSY3Q70JA7 882 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 LAPTM4BQ86VI4 370 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 MYLK4Q86YV6 388 aaPredicted RBP15.28■□□□□ 0.04
CD28-203ENST00000458610 ZC3H7AQ8IWR0 971 aaKnown RBP15.28■□□□□ 0.04
CD28-203ENST00000458610 ZNF843Q8N446 348 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 PHF21BQ96EK2 531 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 NPLQ9BXD5 320 aaPredicted RBP15.28■□□□□ 0.04
CD28-203ENST00000458610 TRIM55Q9BYV6 548 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 SEMA4CQ9C0C4 833 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 GPR83Q9NYM4 423 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 HCN3Q9P1Z3 774 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 FBXL4Q9UKA2 621 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 ZNF451Q9Y4E5 1061 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 ASB1Q9Y576 335 aa15.28■□□□□ 0.04
CD28-203ENST00000458610 CACNA1GO43497 2377 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 ITPR1Q14643 2758 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 SOCS6O14544 535 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 FFAR3O14843 346 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 GPR42O15529 346 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 CHST10O43529 356 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 ALOX12BO75342 701 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 RDH16O75452 317 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 DNAJB5O75953 348 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 CLDN9O95484 217 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 HPP00738 406 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 PRB1P04280 392 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 C8orf89P0DMQ9 161 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 SMIM10L1P0DMW3 83 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 PYGBP11216 843 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 ICAM2P13598 275 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 EEF1DP29692 281 aaKnown RBP15.27■□□□□ 0.04
CD28-203ENST00000458610 BTN3A2P78410 334 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 IFFO1Q0D2I5 559 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 HYAL2Q12891 473 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 RCN2Q14257 317 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 TMEM35AQ53FP2 167 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 CPZQ66K79 652 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 ASB18Q6ZVZ8 466 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 NDUFAF7Q7L592 441 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 PRSS41Q7RTY9 318 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 GOLGA7Q7Z5G4 137 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 PDSS2Q86YH6 399 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 LAS2Q8IYD9 372 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 GALNT16Q8N428 558 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 RIBC1Q8N443 379 aaPredicted RBP15.27■□□□□ 0.04
CD28-203ENST00000458610 OR2L5Q8NG80 312 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 OR11G2Q8NGC1 345 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 PPP4R1Q8TF05 950 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 TBC1D20Q96BZ9 403 aa15.27■□□□□ 0.04
CD28-203ENST00000458610 MS4A6EQ96DS6 147 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms