RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 HPP00738 406 aa17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 PDGFAP04085 211 aa17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 UQCRHP07919 91 aa17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 IL10P22301 178 aa17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 GSTM2P28161 218 aa17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 AGTR2P50052 363 aa17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 EEF1A2Q05639 463 aaKnown RBP17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 SLC29A2Q14542 456 aa17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 TSNAXIP1Q2TAA8 658 aa17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 COLEC12Q5KU26 742 aa17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 VWA5B1Q5TIE3 1220 aa17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 NDUFAF7Q7L592 441 aa17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 PDSS2Q86YH6 399 aa17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 HPS6Q86YV9 775 aa17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 TEX9Q8N6V9 391 aa17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 UTP15Q8TED0 518 aaKnown RBP17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 UBE2E3Q969T4 207 aa17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 ZNF160Q9HCG1 818 aa17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 MLXIPLQ9NP71 852 aa17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 C5AR2Q9P296 337 aa17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 C19orf25Q9UFG5 118 aaPredicted RBP17.1■□□□□ 0.33
PDLIM2-215ENST00000456545 TNRC6AQ8NDV7 1962 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 A0A088AWK7 358 aa17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 PSMD12O00232 456 aaPredicted RBP17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 SMIM24O75264 130 aa17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 JRKO75564 520 aa17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 C8orf89P0DMQ9 161 aa17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 COL6A2P12110 1019 aa17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 ZNF10P21506 573 aaPredicted RBP17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 ALDH18A1P54886 795 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 SNRPNP63162 240 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 MYLK4Q86YV6 388 aaPredicted RBP17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 GSPT2Q8IYD1 628 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 AFAP1L2Q8N4X5 818 aa17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 EIF1ADQ8N9N8 165 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 UBLCP1Q8WVY7 318 aaPredicted RBP17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 TM9SF4Q92544 642 aa17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 MTBPQ96DY7 904 aa17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 THOC3Q96J01 351 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 SEC16BQ96JE7 1060 aa17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 SMAD5Q99717 465 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 SLC6A16Q9GZN6 736 aa17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 RHBGQ9H310 441 aa17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 KLHL31Q9H511 634 aa17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 TNPO3Q9Y5L0 923 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-215ENST00000456545 IQANK1A0A1B0GTG1 560 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 CHST10O43529 356 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 CLEC3AO75596 197 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 B3GALT4O96024 378 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 PCNAP12004 261 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 ARL1P40616 181 aaPredicted RBP17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 CASRP41180 1078 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 CSRP3P50461 194 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 SOX8P57073 446 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 OLR1P78380 273 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 BTN3A2P78410 334 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 ACTN3Q08043 901 aaPredicted RBP17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 TGM3Q08188 693 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 SETDB1Q15047 1291 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 AGAP7PQ5VUJ5 663 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 ADGRD1Q6QNK2 874 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 KBTBD2Q8IY47 623 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 PLD6Q8N2A8 252 aaKnown RBP17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 OR5T3Q8NGG3 340 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 CREB3L4Q8TEY5 395 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 UBTD2Q8WUN7 234 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 ATP6V1E2Q96A05 226 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 AGAP4Q96P64 663 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 MFRPQ9BY79 579 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 TRIM4Q9C037 500 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 VN1R1Q9GZP7 353 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 LHPPQ9H008 270 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 CLK4Q9HAZ1 481 aaKnown RBP17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 ZNF358Q9NW07 568 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 TMCO1Q9UM00 188 aa17.08■□□□□ 0.32
PDLIM2-215ENST00000456545 PCSK5Q92824 1860 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 TTLL8A6PVC2 850 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 ERI3O43414 337 aaKnown RBP17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 CDC123O75794 336 aaPredicted RBP17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 WFS1O76024 890 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 ICAM2P13598 275 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 MTHFD2P13995 350 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 JAK1P23458 1154 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 AP2B1P63010 937 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 TLE1Q04724 770 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 TBCCQ15814 346 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 TECRLQ5HYJ1 363 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 MED27Q6P2C8 311 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 TRIM40Q6P9F5 258 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 ZADH2Q8N4Q0 377 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 GAL3ST3Q96A11 431 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 ISL2Q96A47 359 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 TBC1D20Q96BZ9 403 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 WDR34Q96EX3 536 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 GPR78Q96P69 363 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 OR1F2PQ96R84 312 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 RBCK1Q9BYM8 510 aa17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 REXO4Q9GZR2 422 aaKnown RBP17.07■□□□□ 0.32
PDLIM2-215ENST00000456545 ZNF552Q9H707 407 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms