RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 SOX13Q9UN79 622 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 RNF6Q9Y252 685 aa5.61□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PHF3Q92576 2039 aaKnown RBP5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 KIAA1549Q9HCM3 1950 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 STAB1Q9NY15 2570 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MAGEB17A8MXT2 336 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 E9PLN8 166 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 H0YIG0 161 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 FANCGO15287 622 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CHST10O43529 356 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 OR1F1O43749 312 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CEP104O60308 925 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 GALR3O60755 368 aaPredicted RBP5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ZNF189O75820 626 aaPredicted RBP5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MYO1DO94832 1006 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 LRATO95237 230 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 FGGP02679 453 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CELA3AP09093 270 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SLC35G6P0C7Q6 338 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ICAM2P13598 275 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 HOXB4P17483 251 aaPredicted RBP5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 AGAP20933 346 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MSX1P28360 303 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 DNAJA1P31689 397 aaKnown RBP5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PTGS2P35354 604 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SKIV2L2P42285 1042 aaKnown RBP5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 AGTR2P50052 363 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 HNRNPFP52597 415 aaKnown RBP5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CDKN2DP55273 166 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NUP107P57740 925 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MLF1P58340 268 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TAS2R50P59544 299 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 RAB8AP61006 207 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 AP2B1P63010 937 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TIAL1Q01085 375 aaKnown RBP eCLIP5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ACTN3Q08043 901 aaPredicted RBP5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 KIF5AQ12840 1032 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 GPS1Q13098 491 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 DHX34Q14147 1143 aaKnown RBP5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ARHGAP19Q14CB8 494 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TTLL9Q3SXZ7 439 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 EMC4Q5J8M3 183 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MEI1Q5TIA1 1274 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ADNP2Q6IQ32 1131 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SLC25A25Q6KCM7 469 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CAPN13Q6MZZ7 669 aaPredicted RBP5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 H3F3CQ6NXT2 135 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 AGTRAPQ6RW13 159 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CLNKQ7Z7G1 428 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SDCCAG8Q86SQ7 713 aaPredicted RBP5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TMPRSS11BQ86T26 416 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CAND1Q86VP6 1230 aaKnown RBP5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 C17orf64Q86WR6 236 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 RPS19BP1Q86WX3 136 aaKnown RBP5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ZZZ3Q8IYH5 903 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SYCE1Q8N0S2 351 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CYP4Z2PQ8N1L4 340 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 FAM47BQ8NA70 645 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 FAM98AQ8NCA5 519 aaKnown RBP5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TMEM52Q8NDY8 209 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 FAM57AQ8TBR7 257 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SLC13A3Q8WWT9 602 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PEX13Q92968 403 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TBC1D20Q96BZ9 403 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 LINGO1Q96FE5 620 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MRFAP1L1Q96HT8 127 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PDLIM2Q96JY6 352 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 OR4K3Q96R72 315 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 BAG1Q99933 345 aaPredicted RBP5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SPOCK3Q9BQ16 436 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 VKORC1Q9BQB6 163 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 AICDAQ9GZX7 198 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 DEFB127Q9H1M4 99 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NECTIN3Q9NQS3 549 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PNPLA3Q9NST1 481 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 UTP6Q9NYH9 597 aaKnown RBP5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 BFARQ9NZS9 450 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 KCMF1Q9P0J7 381 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PDE10AQ9Y233 779 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PLEKHA6Q9Y2H5 1048 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MAD1L1Q9Y6D9 718 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ZANQ9Y493 2812 aa5.6□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SONP18583 2426 aaKnown RBP5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CSPG4Q6UVK1 2322 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 IGKV3D-11A0A0A0MRZ8 115 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ZCWPW2A0A1B0GU75 182 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SAGE2PA6NJ88 616 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ZNF839A8K0R7 811 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 KDM4EB2RXH2 506 aaPredicted RBP5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NPIPA2E9PIF3 369 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NPIPA3F8WFD2 350 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 H3BMM5 538 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NRDCO43847 1150 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PEX1O43933 1283 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ITGA10O75578 1167 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TOXO94900 526 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 OR6B1O95007 311 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ZWINTO95229 277 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 GUCA1CO95843 209 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ALOX12P18054 663 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms