RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 OTCP00480 354 aa14.9□□□□□ -0.02
VCX3B-204ENST00000453306 EIF2S1P05198 315 aaKnown RBP14.9□□□□□ -0.02
VCX3B-204ENST00000453306 NR1D1P20393 614 aa14.9□□□□□ -0.02
VCX3B-204ENST00000453306 ITGAXP20702 1163 aa14.9□□□□□ -0.02
VCX3B-204ENST00000453306 RPS15AP62244 130 aaKnown RBP14.9□□□□□ -0.02
VCX3B-204ENST00000453306 BST1Q10588 318 aa14.9□□□□□ -0.02
VCX3B-204ENST00000453306 RCN2Q14257 317 aa14.9□□□□□ -0.02
VCX3B-204ENST00000453306 UGT3A2Q3SY77 523 aa14.9□□□□□ -0.02
VCX3B-204ENST00000453306 ZC3H12BQ5HYM0 836 aaKnown RBP14.9□□□□□ -0.02
VCX3B-204ENST00000453306 TMTC4Q5T4D3 741 aa14.9□□□□□ -0.02
VCX3B-204ENST00000453306 GPRIN3Q6ZVF9 776 aa14.9□□□□□ -0.02
VCX3B-204ENST00000453306 PTRH1Q86Y79 214 aaKnown RBP14.9□□□□□ -0.02
VCX3B-204ENST00000453306 ZNF655Q8N720 491 aaPredicted RBP14.9□□□□□ -0.02
VCX3B-204ENST00000453306 CDYL2Q8N8U2 506 aa14.9□□□□□ -0.02
VCX3B-204ENST00000453306 ZNF473Q8WTR7 871 aaKnown RBP14.9□□□□□ -0.02
VCX3B-204ENST00000453306 ATP6V1E2Q96A05 226 aa14.9□□□□□ -0.02
VCX3B-204ENST00000453306 C10orf90Q96M02 699 aa14.9□□□□□ -0.02
VCX3B-204ENST00000453306 EFCAB11Q9BUY7 163 aa14.9□□□□□ -0.02
VCX3B-204ENST00000453306 MID1IP1Q9NPA3 183 aa14.9□□□□□ -0.02
VCX3B-204ENST00000453306 MED4Q9NPJ6 270 aa14.9□□□□□ -0.02
VCX3B-204ENST00000453306 FAM53CQ9NYF3 392 aa14.9□□□□□ -0.02
VCX3B-204ENST00000453306 ZDHHC2Q9UIJ5 367 aa14.9□□□□□ -0.02
VCX3B-204ENST00000453306 ZFP69BQ9UJL9 534 aa14.9□□□□□ -0.02
VCX3B-204ENST00000453306 RARRES3Q9UL19 164 aa14.9□□□□□ -0.02
VCX3B-204ENST00000453306 RUVBL1Q9Y265 456 aaKnown RBP14.9□□□□□ -0.02
VCX3B-204ENST00000453306 SDK2Q58EX2 2172 aa14.9□□□□□ -0.02
VCX3B-204ENST00000453306 H0YIV9 168 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 ZNF749O43361 778 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 UGDHO60701 494 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 OR2B3O76000 313 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 STK17BO94768 372 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 ETHE1O95571 254 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 MLYCDO95822 493 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 NTRK1P04629 796 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 CAPN1P07384 714 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 HNF4AP41235 474 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 ITGA1P56199 1179 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 CDC20Q12834 499 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 IL11RAQ14626 422 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 NAA25Q14CX7 972 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 GGTA1PQ4G0N0 100 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 CFAP157Q5JU67 520 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 LCN10Q6JVE6 187 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 MED27Q6P2C8 311 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 SCIMPQ6UWF3 145 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 TIPARPQ7Z3E1 657 aaKnown RBP14.89□□□□□ -0.03
VCX3B-204ENST00000453306 UBE3DQ7Z6J8 389 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 ASPGQ86U10 573 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 MYLK4Q86YV6 388 aaPredicted RBP14.89□□□□□ -0.03
VCX3B-204ENST00000453306 TMEM151BQ8IW70 566 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 ESX1Q8N693 406 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 CSNK1A1LQ8N752 337 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 HUS1BQ8NHY5 278 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 C9orf43Q8TAL5 461 aaPredicted RBP14.89□□□□□ -0.03
VCX3B-204ENST00000453306 APOBEC4Q8WW27 367 aaKnown RBP14.89□□□□□ -0.03
VCX3B-204ENST00000453306 ZNF75CPQ92670 426 aaPredicted RBP14.89□□□□□ -0.03
VCX3B-204ENST00000453306 MTFMTQ96DP5 389 aaKnown RBP14.89□□□□□ -0.03
VCX3B-204ENST00000453306 THAP11Q96EK4 314 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 TUBB1Q9H4B7 451 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 TRPS1Q9UHF7 1281 aa14.89□□□□□ -0.03
VCX3B-204ENST00000453306 TMEM184BQ9Y519 407 aaPredicted RBP14.89□□□□□ -0.03
VCX3B-204ENST00000453306 MANBAO00462 879 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 FOXS1O43638 330 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 SNNO75324 88 aaPredicted RBP14.88□□□□□ -0.03
VCX3B-204ENST00000453306 SH3BGRLO75368 114 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 SMIM10L1P0DMW3 83 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 PRKAR1AP10644 381 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 HNRNPH1P31943 449 aaKnown RBP14.88□□□□□ -0.03
VCX3B-204ENST00000453306 AHRP35869 848 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 PKNOX1P55347 436 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 ABCE1P61221 599 aaKnown RBP14.88□□□□□ -0.03
VCX3B-204ENST00000453306 STX3Q13277 289 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 LAPTM5Q13571 262 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 MAP7Q14244 749 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.88□□□□□ -0.03
VCX3B-204ENST00000453306 CRTC2Q53ET0 693 aaPredicted RBP14.88□□□□□ -0.03
VCX3B-204ENST00000453306 SGO1Q5FBB7 561 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 CLEC6AQ6EIG7 209 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 PRSS41Q7RTY9 318 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 CUZD1Q86UP6 607 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 KRT78Q8N1N4 520 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 NT5CQ8TCD5 201 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 SLC13A3Q8WWT9 602 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 SMIM10Q96HG1 83 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 HBEGFQ99075 208 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 MTERF1Q99551 399 aaKnown RBP14.88□□□□□ -0.03
VCX3B-204ENST00000453306 SLC6A16Q9GZN6 736 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 PITHD1Q9GZP4 211 aaPredicted RBP14.88□□□□□ -0.03
VCX3B-204ENST00000453306 SLC22A11Q9NSA0 550 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 DHCR7Q9UBM7 475 aaKnown RBP14.88□□□□□ -0.03
VCX3B-204ENST00000453306 SERTAD3Q9UJW9 196 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 TSC22D4Q9Y3Q8 395 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 PCDHB3Q9Y5E6 796 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 PTGDR2Q9Y5Y4 395 aa14.88□□□□□ -0.03
VCX3B-204ENST00000453306 PTPN13Q12923 2485 aa14.87□□□□□ -0.03
VCX3B-204ENST00000453306 BSNQ9UPA5 3926 aa14.87□□□□□ -0.03
VCX3B-204ENST00000453306 LOC101059948A0A1B0GTJ6 334 aa14.87□□□□□ -0.03
VCX3B-204ENST00000453306 HYKKA2RU49 373 aa14.87□□□□□ -0.03
VCX3B-204ENST00000453306 LRIT2A6NDA9 550 aa14.87□□□□□ -0.03
VCX3B-204ENST00000453306 MAGEB17A8MXT2 336 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms