RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 MNX1P50219 401 aaPredicted RBP21.3■■□□□ 1
TTC3-210ENST00000450533 MVDP53602 400 aa21.3■■□□□ 1
TTC3-210ENST00000450533 NTHL1P78549 312 aa21.3■■□□□ 1
TTC3-210ENST00000450533 COMMD6Q7Z4G1 85 aa21.3■■□□□ 1
TTC3-210ENST00000450533 CAMKMTQ7Z624 323 aa21.3■■□□□ 1
TTC3-210ENST00000450533 SVOPQ8N4V2 548 aa21.3■■□□□ 1
TTC3-210ENST00000450533 NECTIN3Q9NQS3 549 aa21.3■■□□□ 1
TTC3-210ENST00000450533 PRDM8Q9NQV8 689 aa21.3■■□□□ 1
TTC3-210ENST00000450533 ZNF282Q9UDV7 671 aaPredicted RBP21.3■■□□□ 1
TTC3-210ENST00000450533 CORO2BQ9UQ03 480 aa21.3■■□□□ 1
TTC3-210ENST00000450533 B3GNT3Q9Y2A9 372 aa21.3■■□□□ 1
TTC3-210ENST00000450533 LYVE1Q9Y5Y7 322 aa21.3■■□□□ 1
TTC3-210ENST00000450533 RNASET2O00584 256 aaKnown RBP21.29■■□□□ 1
TTC3-210ENST00000450533 C1orf105O95561 183 aa21.29■■□□□ 1
TTC3-210ENST00000450533 PPIBP23284 216 aaKnown RBP21.29■■□□□ 1
TTC3-210ENST00000450533 SELENOWP63302 87 aa21.29■■□□□ 1
TTC3-210ENST00000450533 PAGE2BQ5JRK9 111 aa21.29■■□□□ 1
TTC3-210ENST00000450533 PARS2Q7L3T8 475 aaKnown RBP21.29■■□□□ 1
TTC3-210ENST00000450533 PRSS48Q7RTY5 328 aa21.29■■□□□ 1
TTC3-210ENST00000450533 ADCK1Q86TW2 530 aa21.29■■□□□ 1
TTC3-210ENST00000450533 WDR48Q8TAF3 677 aa21.29■■□□□ 1
TTC3-210ENST00000450533 METTL2AQ96IZ6 378 aaKnown RBP21.29■■□□□ 1
TTC3-210ENST00000450533 VPS35Q96QK1 796 aa21.29■■□□□ 1
TTC3-210ENST00000450533 SLC35A5Q9BS91 424 aa21.29■■□□□ 1
TTC3-210ENST00000450533 GPBP1L1Q9HC44 474 aaPredicted RBP21.29■■□□□ 1
TTC3-210ENST00000450533 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.29■■□□□ 1
TTC3-210ENST00000450533 PADI2Q9Y2J8 665 aa21.29■■□□□ 1
TTC3-210ENST00000450533 SOBPA7XYQ1 873 aa21.29■■□□□ 1
TTC3-210ENST00000450533 K7ESM1 405 aa21.29■■□□□ 1
TTC3-210ENST00000450533 KPNA3O00505 521 aaPredicted RBP21.29■■□□□ 1
TTC3-210ENST00000450533 NPPBP16860 134 aa21.29■■□□□ 1
TTC3-210ENST00000450533 C21orf33P30042 268 aaPredicted RBP21.29■■□□□ 1
TTC3-210ENST00000450533 BCAP31P51572 246 aa21.29■■□□□ 1
TTC3-210ENST00000450533 ERVFC1P60507 584 aa21.29■■□□□ 1
TTC3-210ENST00000450533 SYT16Q17RD7 645 aa21.29■■□□□ 1
TTC3-210ENST00000450533 FAM180BQ6P0A1 224 aa21.29■■□□□ 1
TTC3-210ENST00000450533 P3H2Q8IVL5 708 aa21.29■■□□□ 1
TTC3-210ENST00000450533 SLC5A8Q8N695 610 aa21.29■■□□□ 1
TTC3-210ENST00000450533 HRASLS5Q96KN8 279 aa21.29■■□□□ 1
TTC3-210ENST00000450533 ZSWIM3Q96MP5 696 aa21.29■■□□□ 1
TTC3-210ENST00000450533 TCF25Q9BQ70 676 aa21.29■■□□□ 1
TTC3-210ENST00000450533 FAM83CQ9BQN1 747 aa21.29■■□□□ 1
TTC3-210ENST00000450533 SPATA9Q9BWV2 254 aa21.29■■□□□ 1
TTC3-210ENST00000450533 SPNS1Q9H2V7 528 aa21.29■■□□□ 1
TTC3-210ENST00000450533 REEP4Q9H6H4 257 aa21.29■■□□□ 1
TTC3-210ENST00000450533 CCNB1IP1Q9NPC3 277 aa21.29■■□□□ 1
TTC3-210ENST00000450533 CD36P16671 472 aa21.28■■□□□ 1
TTC3-210ENST00000450533 RAB15P59190 212 aa21.28■■□□□ 1
TTC3-210ENST00000450533 MVKQ03426 396 aa21.28■■□□□ 1
TTC3-210ENST00000450533 ZNF763Q0D2J5 394 aa21.28■■□□□ 1
TTC3-210ENST00000450533 DMC1Q14565 340 aa21.28■■□□□ 1
TTC3-210ENST00000450533 TRAPPC5Q8IUR0 188 aa21.28■■□□□ 1
TTC3-210ENST00000450533 VN1R2Q8NFZ6 395 aa21.28■■□□□ 1
TTC3-210ENST00000450533 NFKBIDQ8NI38 313 aa21.28■■□□□ 1
TTC3-210ENST00000450533 PROX1Q92786 737 aa21.28■■□□□ 1
TTC3-210ENST00000450533 TRIM39Q9HCM9 518 aa21.28■■□□□ 1
TTC3-210ENST00000450533 DAPK2Q9UIK4 370 aa21.28■■□□□ 1
TTC3-210ENST00000450533 MAP4K5Q9Y4K4 846 aa21.28■■□□□ 1
TTC3-210ENST00000450533 CDH23Q9H251 3354 aa21.28■■□□□ 1
TTC3-210ENST00000450533 TSPAN11A1L157 253 aa21.28■■□□□ 1
TTC3-210ENST00000450533 CDH12P55289 794 aa21.28■■□□□ 1
TTC3-210ENST00000450533 PPIGQ13427 754 aaKnown RBP eCLIP21.28■■□□□ 17e-7■□□□□ 10
TTC3-210ENST00000450533 ARHGEF6Q15052 776 aa21.28■■□□□ 1
TTC3-210ENST00000450533 TEAD4Q15561 434 aa21.28■■□□□ 1
TTC3-210ENST00000450533 DGUOKQ16854 277 aa21.28■■□□□ 1
TTC3-210ENST00000450533 TRIM16LQ309B1 348 aa21.28■■□□□ 1
TTC3-210ENST00000450533 DYNC2LI1Q8TCX1 351 aa21.28■■□□□ 1
TTC3-210ENST00000450533 OR2AG1Q9H205 316 aa21.28■■□□□ 1
TTC3-210ENST00000450533 CHD7Q9P2D1 2997 aa21.27■■□□□ 1
TTC3-210ENST00000450533 RHOP08100 348 aa21.27■■□□□ 1
TTC3-210ENST00000450533 MPEG1Q2M385 716 aa21.27■■□□□ 1
TTC3-210ENST00000450533 PLPP4Q5VZY2 271 aa21.27■■□□□ 1
TTC3-210ENST00000450533 KLHDC8AQ8IYD2 350 aa21.27■■□□□ 1
TTC3-210ENST00000450533 ZNF740Q8NDX6 193 aa21.27■■□□□ 1
TTC3-210ENST00000450533 TAMM41Q96BW9 452 aa21.27■■□□□ 1
TTC3-210ENST00000450533 VMP1Q96GC9 406 aa21.27■■□□□ 1
TTC3-210ENST00000450533 ALPK1Q96QP1 1244 aa21.27■■□□□ 1
TTC3-210ENST00000450533 COPS4Q9BT78 406 aa21.27■■□□□ 1
TTC3-210ENST00000450533 GABARAPL3Q9BY60 117 aa21.27■■□□□ 1
TTC3-210ENST00000450533 TRNAU1APQ9NX07 287 aaKnown RBP21.27■■□□□ 1
TTC3-210ENST00000450533 NFKBIL1Q9UBC1 381 aaPredicted RBP21.27■■□□□ 1
TTC3-210ENST00000450533 SPASTQ9UBP0 616 aa21.27■■□□□ 1
TTC3-210ENST00000450533 OR2A25A4D2G3 310 aa21.27■□□□□ 0.99
TTC3-210ENST00000450533 TMEM247A6NEH6 219 aa21.27■□□□□ 0.99
TTC3-210ENST00000450533 PRAMEF25A6NGN4 478 aa21.27■□□□□ 0.99
TTC3-210ENST00000450533 J3KTA2 159 aa21.27■□□□□ 0.99
TTC3-210ENST00000450533 ZNF197O14709 1029 aa21.27■□□□□ 0.99
TTC3-210ENST00000450533 FUT4P22083 530 aa21.27■□□□□ 0.99
TTC3-210ENST00000450533 TGFBR2P37173 567 aa21.27■□□□□ 0.99
TTC3-210ENST00000450533 IDH2P48735 452 aaKnown RBP21.27■□□□□ 0.99
TTC3-210ENST00000450533 NUDT6P53370 316 aa21.27■□□□□ 0.99
TTC3-210ENST00000450533 PRMT2P55345 433 aa21.27■□□□□ 0.99
TTC3-210ENST00000450533 SPIBQ01892 262 aa21.27■□□□□ 0.99
TTC3-210ENST00000450533 RELAQ04206 551 aa21.27■□□□□ 0.99
TTC3-210ENST00000450533 PCDH1Q08174 1060 aa21.27■□□□□ 0.99
TTC3-210ENST00000450533 C2orf80Q0P641 193 aa21.27■□□□□ 0.99
TTC3-210ENST00000450533 SCARB2Q14108 478 aa21.27■□□□□ 0.99
TTC3-210ENST00000450533 PRSS36Q5K4E3 855 aa21.27■□□□□ 0.99
TTC3-210ENST00000450533 ERAP2Q6P179 960 aa21.27■□□□□ 0.99
TTC3-210ENST00000450533 C2orf73Q8N5S3 287 aaPredicted RBP21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms