RNA–Protein interactions for RNA: ENST00000449098.5

HNRNPC-204, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-204ENST00000449098 MYLK4Q86YV6 388 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-204ENST00000449098 SHISA5Q8N114 240 aa11.54□□□□□ -0.56
HNRNPC-204ENST00000449098 GALNT16Q8N428 558 aa11.54□□□□□ -0.56
HNRNPC-204ENST00000449098 AFAP1L2Q8N4X5 818 aa11.54□□□□□ -0.56
HNRNPC-204ENST00000449098 PTGR2Q8N8N7 351 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-204ENST00000449098 FDCSPQ8NFU4 85 aa11.54□□□□□ -0.56
HNRNPC-204ENST00000449098 OR5T3Q8NGG3 340 aa11.54□□□□□ -0.56
HNRNPC-204ENST00000449098 UTP15Q8TED0 518 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-204ENST00000449098 CREB3L4Q8TEY5 395 aa11.54□□□□□ -0.56
HNRNPC-204ENST00000449098 PHF21BQ96EK2 531 aa11.54□□□□□ -0.56
HNRNPC-204ENST00000449098 VPS50Q96JG6 964 aa11.54□□□□□ -0.56
HNRNPC-204ENST00000449098 MESP1Q9BRJ9 268 aa11.54□□□□□ -0.56
HNRNPC-204ENST00000449098 EFCAB11Q9BUY7 163 aa11.54□□□□□ -0.56
HNRNPC-204ENST00000449098 TGIF2Q9GZN2 237 aa11.54□□□□□ -0.56
HNRNPC-204ENST00000449098 SLC6A16Q9GZN6 736 aa11.54□□□□□ -0.56
HNRNPC-204ENST00000449098 KLHL31Q9H511 634 aa11.54□□□□□ -0.56
HNRNPC-204ENST00000449098 ATP13A2Q9NQ11 1180 aa11.54□□□□□ -0.56
HNRNPC-204ENST00000449098 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.54□□□□□ -0.56
HNRNPC-204ENST00000449098 V9GYY5 206 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-204ENST00000449098 ZNF462Q96JM2 2506 aa11.54□□□□□ -0.56
HNRNPC-204ENST00000449098 SMIM23A6NLE4 172 aa11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 GALR3O60755 368 aaPredicted RBP11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 BMP10O95393 424 aa11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 PDGFAP04085 211 aa11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 SERPINA6P08185 405 aa11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 PCNAP12004 261 aa11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 COL6A2P12110 1019 aa11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 EPORP19235 508 aa11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 CD22P20273 847 aa11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 ITGA3P26006 1051 aa11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 STXBP1P61764 594 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 VSNL1P62760 191 aa11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 EEF1A2Q05639 463 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 LAPTM5Q13571 262 aa11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 COLEC12Q5KU26 742 aa11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 OR11G2Q8NGC1 345 aa11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 PEX11GQ96HA9 241 aa11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 NUDT9Q9BW91 350 aa11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 PITHD1Q9GZP4 211 aaPredicted RBP11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 NT5DC2Q9H857 520 aa11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 GPR83Q9NYM4 423 aa11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 PCDHGA9Q9Y5G4 932 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-204ENST00000449098 A0A0G2JN53 185 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 GOLGA8RI6L899 631 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 ERI3O43414 337 aaKnown RBP11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 SLC28A2O43868 658 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 KLK8O60259 260 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 SMIM24O75264 130 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 CDC123O75794 336 aaPredicted RBP11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 SIX3O95343 332 aaPredicted RBP11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 SHBGP04278 402 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 GSTM2P28161 218 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 EEF1DP29692 281 aaKnown RBP11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 ARL1P40616 181 aaPredicted RBP11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 SLCO1A2P46721 670 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 HYAL2Q12891 473 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 AIMP2Q13155 320 aaKnown RBP11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 NAA30Q147X3 362 aaPredicted RBP11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 TBCCQ15814 346 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 IRAK1BP1Q5VVH5 260 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 ADNP2Q6IQ32 1131 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 NIPAL1Q6NVV3 410 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 TIFABQ6ZNK6 161 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 PARP9Q8IXQ6 854 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 TEX19Q8NA77 164 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 METTL21AQ8WXB1 218 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.52□□□□□ -0.573e-6■■■■■ 50.8
HNRNPC-204ENST00000449098 WDR34Q96EX3 536 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 FAR2Q96K12 515 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 MRPL57Q9BQC6 102 aaKnown RBP11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 VN1R1Q9GZP7 353 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 MRPL46Q9H2W6 279 aaKnown RBP11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 RHBGQ9H310 441 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 ACTR8Q9H981 624 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 ZNF160Q9HCG1 818 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 FETUBQ9UGM5 382 aa11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 ZNF490Q9ULM2 529 aaPredicted RBP11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 TNPO3Q9Y5L0 923 aaKnown RBP11.52□□□□□ -0.57
HNRNPC-204ENST00000449098 NSG1A0A0A6YYJ2 146 aa11.51□□□□□ -0.57
HNRNPC-204ENST00000449098 OR2W5A6NFC9 320 aa11.51□□□□□ -0.57
HNRNPC-204ENST00000449098 C4orf51C9J302 202 aa11.51□□□□□ -0.57
HNRNPC-204ENST00000449098 CHST10O43529 356 aa11.51□□□□□ -0.57
HNRNPC-204ENST00000449098 DNAJB6O75190 326 aa11.51□□□□□ -0.57
HNRNPC-204ENST00000449098 CLEC3AO75596 197 aa11.51□□□□□ -0.57
HNRNPC-204ENST00000449098 CEACAM4O75871 244 aa11.51□□□□□ -0.57
HNRNPC-204ENST00000449098 C8orf89P0DMQ9 161 aa11.51□□□□□ -0.57
HNRNPC-204ENST00000449098 HNRNPH1P31943 449 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-204ENST00000449098 PLA2G16P53816 162 aa11.51□□□□□ -0.57
HNRNPC-204ENST00000449098 BTN3A2P78410 334 aa11.51□□□□□ -0.57
HNRNPC-204ENST00000449098 GTF2H2Q13888 395 aa11.51□□□□□ -0.57
HNRNPC-204ENST00000449098 PCBP2Q15366 365 aaKnown RBP eCLIP11.51□□□□□ -0.571e-323■■■□□ 15.5
HNRNPC-204ENST00000449098 GTF2H2CQ6P1K8 395 aa11.51□□□□□ -0.57
HNRNPC-204ENST00000449098 GOLGA7Q7Z5G4 137 aa11.51□□□□□ -0.57
HNRNPC-204ENST00000449098 VN1R5Q7Z5H4 357 aa11.51□□□□□ -0.57
HNRNPC-204ENST00000449098 UBE2E3Q969T4 207 aa11.51□□□□□ -0.57
HNRNPC-204ENST00000449098 ATP6V1E2Q96A05 226 aa11.51□□□□□ -0.57
HNRNPC-204ENST00000449098 GAL3ST3Q96A11 431 aa11.51□□□□□ -0.57
HNRNPC-204ENST00000449098 SEC16BQ96JE7 1060 aa11.51□□□□□ -0.57
HNRNPC-204ENST00000449098 REXO4Q9GZR2 422 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-204ENST00000449098 AICDAQ9GZX7 198 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms