RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ITGB2P05107 769 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 RPS17P08708 135 aaKnown RBP13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 ZNF888P0CJ79 500 aaPredicted RBP13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 CD22P20273 847 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 ZNF10P21506 573 aaPredicted RBP13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 OTX2P32243 289 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 PRKAA2P54646 552 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 TGM3Q08188 693 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 ZNF844Q08AG5 666 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 E2F2Q14209 437 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 NKG7Q16617 165 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 ATP1A1-AS1Q5TC04 95 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 BORAQ6PGQ7 559 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 PRSS58Q8IYP2 241 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 RDH11Q8TC12 318 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 STT3BQ8TCJ2 826 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 APOPT1Q96IL0 206 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 MAGEB10Q96LZ2 347 aaPredicted RBP13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 NSUN5Q96P11 429 aaKnown RBP13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 UBL7Q96S82 380 aaPredicted RBP13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 RHBGQ9H310 441 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 SOX17Q9H6I2 414 aaPredicted RBP13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 C14orf105Q9NVL8 296 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 SENP1Q9P0U3 644 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 ZNF490Q9ULM2 529 aaPredicted RBP13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 MAN2B2Q9Y2E5 1009 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 NAALAD2Q9Y3Q0 740 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 BAHCC1Q9P281 2608 aa13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 MDC1Q14676 2089 aaKnown RBP13.3□□□□□ -0.28
GTF3C3-206ENST00000448539 PEX12O00623 359 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 FFAR3O14843 346 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 GPR42O15529 346 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 PLIN3O60664 434 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 RDH16O75452 317 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 OTCP00480 354 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 IGHEP01854 428 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 PROCP04070 461 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 ZGLP1P0C6A0 271 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 MYZAPP0CAP1 466 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 CPA3P15088 417 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 IMPDH1P20839 514 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 CCR10P46092 362 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 RAB8AP61006 207 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 MAT1AQ00266 395 aaKnown RBP13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 CLCQ05315 142 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 IL10RAQ13651 578 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 DDX39BQ13838 428 aaKnown RBP13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 CPSF6Q16630 551 aaKnown RBP eCLIP13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 DEFB134Q4QY38 66 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 ZNF678Q5SXM1 525 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 FAM69BQ5VUD6 431 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 TTC19Q6DKK2 380 aaPredicted RBP13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 TRIM40Q6P9F5 258 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 LRIG3Q6UXM1 1119 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 ZYG11AQ6WRX3 759 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 SHISA6Q6ZSJ9 500 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 PRSS41Q7RTY9 318 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 MILR1Q7Z6M3 343 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 LAS2Q8IYD9 372 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 IQCKQ8N0W5 287 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 AFAP1L2Q8N4X5 818 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 AMER3Q8N944 861 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 SRFBP1Q8NEF9 429 aaKnown RBP13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 UTP15Q8TED0 518 aaKnown RBP13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 ZNF483Q8TF39 744 aaPredicted RBP13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 GAL3ST3Q96A11 431 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 VPS50Q96JG6 964 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 IP6K3Q96PC2 410 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 ZIM3Q96PE6 472 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 CENPKQ9BS16 269 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 CRB3Q9BUF7 120 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 NTMT1Q9BV86 223 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 C1QTNF3Q9BXJ4 246 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 REXO4Q9GZR2 422 aaKnown RBP13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 KLHL31Q9H511 634 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 MKS1Q9NXB0 559 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 HCN3Q9P1Z3 774 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 EMCNQ9ULC0 261 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 STK38LQ9Y2H1 464 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 SEC16AO15027 2179 aa13.29□□□□□ -0.28
GTF3C3-206ENST00000448539 PTPRQQ9UMZ3 2332 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 LRIT2A6NDA9 550 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 ZNF860A6NHJ4 632 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 VSTM2BA6NLU5 285 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 EIF4E1BA6NMX2 242 aaKnown RBP13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 ERVH48-1M5A8F1 160 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 OR7A17O14581 309 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 ERI3O43414 337 aaKnown RBP13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 GALR3O60755 368 aaPredicted RBP13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 CNOT3O75175 753 aaKnown RBP13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 MLYCDO95822 493 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 HEXBP07686 556 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 FURINP09958 794 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 CDH13P55290 713 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 BTN3A2P78410 334 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 HYAL2Q12891 473 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 TBR1Q16650 682 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 SYT16Q17RD7 645 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 VWA2Q5GFL6 755 aa13.28□□□□□ -0.28
GTF3C3-206ENST00000448539 CFAP157Q5JU67 520 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms