RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 DUX4Q9UBX2 424 aa10.38□□□□□ -0.75
LINC00342-202ENST00000448494 EVLQ9UI08 416 aaPredicted RBP10.38□□□□□ -0.75
LINC00342-202ENST00000448494 MEIKINA0A087WXM9 373 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 UBA6A0AVT1 1052 aaPredicted RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 FAM221BA6H8Z2 402 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 POM121BA6NF01 834 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 USP17L5A8MUK1 530 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 MITFO75030 526 aaPredicted RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 TRUB2O95900 331 aaKnown RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 SERPINA1P01009 418 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 SAGP10523 405 aaPredicted RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 HAPLN1P10915 354 aaPredicted RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 RHCEP18577 417 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 MGAT1P26572 445 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 PBLDP30039 288 aaPredicted RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 PIK3CGP48736 1102 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 MRPL19P49406 292 aaKnown RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 CDH4P55283 916 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 CRYZQ08257 329 aaKnown RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 ACER2Q5QJU3 275 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 DDI2Q5TDH0 399 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 KIAA0319Q5VV43 1072 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 B3GNTL1Q67FW5 361 aaPredicted RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 METAP1DQ6UB28 335 aaPredicted RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 KANSL1Q7Z3B3 1105 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 SERINC5Q86VE9 423 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 ZNF454Q8N9F8 522 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 TTC29Q8NA56 475 aaPredicted RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 APH1BQ8WW43 257 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 ISG20Q96AZ6 181 aaKnown RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 SLC22A18Q96BI1 424 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 NSUN4Q96CB9 384 aaKnown RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 DYNLL2Q96FJ2 89 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 SCRN2Q96FV2 425 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 ATXN7L3BQ96GX2 97 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 CCDC17Q96LX7 622 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 RNF157Q96PX1 679 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 ZPBPQ9BS86 351 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 POMKQ9H5K3 350 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 AGO3Q9H9G7 860 aaKnown RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 FBRSL1Q9HCM7 1045 aaKnown RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 IMP3Q9NV31 184 aaKnown RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 PPP4R1LQ9P1A2 415 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 ARHGAP28Q9P2N2 729 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 GPR160Q9UJ42 338 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 LEF1Q9UJU2 399 aaPredicted RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 NHSQ6T4R5 1651 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 TNRC6CQ9HCJ0 1690 aaKnown RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 FOCADQ5VW36 1801 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 C5orf52A6NGY3 159 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 CLCA1A8K7I4 914 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 ARHGEF33A8MVX0 844 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 C6orf229H3BNL8 230 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 GSTA4O15217 222 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 AOC2O75106 756 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 RAD17O75943 681 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 S1PR4O95977 384 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 IFNGP01579 166 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 HOXC4P09017 264 aaPredicted RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 HIST1H2AGP0C0S8 130 aaPredicted RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 PFKLP17858 780 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 HIST1H2ADP20671 130 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 NOVP48745 357 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 CRADDP78560 199 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 MC2RQ01718 297 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 UAP1L1Q3KQV9 507 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 CDNFQ49AH0 187 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 CELF3Q5SZQ8 465 aaKnown RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 HIST2H2AA3Q6FI13 130 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 CES3Q6UWW8 571 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 CYHR1Q6ZMK1 362 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 GALNT5Q7Z7M9 940 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 CYP4Z1Q86W10 505 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 SYNE4Q8N205 404 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 AVL9Q8NBF6 648 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 LENG9Q96B70 501 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 C14orf144Q96I85 54 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 HIST1H2AHQ96KK5 128 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 GPR22Q99680 433 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 HIST1H2AJQ99878 128 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 SH3BP4Q9P0V3 963 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 SPASTQ9UBP0 616 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 GHRLQ9UBU3 117 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 SLC39A10Q9ULF5 831 aa10.37□□□□□ -0.75
LINC00342-202ENST00000448494 PPIEQ9UNP9 301 aaKnown RBP10.37□□□□□ -0.75
LINC00342-202ENST00000448494 CASC3O15234 703 aaKnown RBP10.36□□□□□ -0.75
LINC00342-202ENST00000448494 KCNQ2O43526 872 aa10.36□□□□□ -0.75
LINC00342-202ENST00000448494 CXCL14O95715 111 aa10.36□□□□□ -0.75
LINC00342-202ENST00000448494 EDN3P14138 238 aa10.36□□□□□ -0.75
LINC00342-202ENST00000448494 SLC19A1P41440 591 aa10.36□□□□□ -0.75
LINC00342-202ENST00000448494 GLRBP48167 497 aa10.36□□□□□ -0.75
LINC00342-202ENST00000448494 TBX4P57082 545 aa10.36□□□□□ -0.75
LINC00342-202ENST00000448494 RAB5BP61020 215 aa10.36□□□□□ -0.75
LINC00342-202ENST00000448494 ZNF155Q12901 538 aaPredicted RBP10.36□□□□□ -0.75
LINC00342-202ENST00000448494 C9orf152Q5JTZ5 239 aa10.36□□□□□ -0.75
LINC00342-202ENST00000448494 PRAMEF13Q5VWM6 474 aa10.36□□□□□ -0.75
LINC00342-202ENST00000448494 DHRS7BQ6IAN0 325 aaPredicted RBP10.36□□□□□ -0.75
LINC00342-202ENST00000448494 TMEM270Q6UE05 265 aa10.36□□□□□ -0.75
LINC00342-202ENST00000448494 DENND1CQ8IV53 801 aa10.36□□□□□ -0.75
LINC00342-202ENST00000448494 PDZD9Q8IXQ8 264 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms