RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 NAALAD2Q9Y3Q0 740 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 A0A1W2PPM1 405 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 IDSB3KWA1 339 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 COPEO14579 308 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 KLK8O60259 260 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 KLHL18O94889 574 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 ALPPP05187 535 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 SERPINA6P08185 405 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 MTHFD2P13995 350 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 ACPPP15309 386 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 KRT4P19013 534 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 IL10P22301 178 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 TGM3Q08188 693 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 CHIT1Q13231 466 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 SETDB1Q15047 1291 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 VWA2Q5GFL6 755 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 DCAF10Q5QP82 559 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 PPP1R32Q7Z5V6 425 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 ZNF605Q86T29 641 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 CYP4X1Q8N118 509 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 ZNF843Q8N446 348 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 AMER3Q8N944 861 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 IQCGQ9H095 443 aaKnown RBP15.52■□□□□ 0.08
SF3A1-204ENST00000447376 SPNS1Q9H2V7 528 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 ZNF71Q9NQZ8 489 aaPredicted RBP15.52■□□□□ 0.08
SF3A1-204ENST00000447376 GPR83Q9NYM4 423 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 MKL2Q9ULH7 1088 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 GRID1Q9ULK0 1009 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 PCDHGB7Q9Y5F8 929 aa15.52■□□□□ 0.08
SF3A1-204ENST00000447376 PCDHGA9Q9Y5G4 932 aaKnown RBP15.52■□□□□ 0.08
SF3A1-204ENST00000447376 FER1L5A0AVI2 2057 aa15.52■□□□□ 0.07
SF3A1-204ENST00000447376 ATMQ13315 3056 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 B8ZZF3 427 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 STX16-NPEPL1H3BU86 382 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 SGK494L7N484 410 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 STX16O14662 325 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 RGS16O15492 202 aaPredicted RBP15.51■□□□□ 0.07
SF3A1-204ENST00000447376 CTIFO43310 598 aaKnown RBP15.51■□□□□ 0.07
SF3A1-204ENST00000447376 RDH16O75452 317 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 DNAJB5O75953 348 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 CYC1P08574 325 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 ZNF888P0CJ79 500 aaPredicted RBP15.51■□□□□ 0.07
SF3A1-204ENST00000447376 SERPINB1P30740 379 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 CRHR1P34998 444 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 ARL1P40616 181 aaPredicted RBP15.51■□□□□ 0.07
SF3A1-204ENST00000447376 XCR1P46094 333 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 PHEXP78562 749 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 AIMP2Q13155 320 aaKnown RBP15.51■□□□□ 0.07
SF3A1-204ENST00000447376 DOC2AQ14183 400 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 TBCCQ15814 346 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 CCDC153Q494R4 210 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 MINDY4Q4G0A6 757 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 DEFB134Q4QY38 66 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 TOR1AIP1Q5JTV8 583 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 LRIG3Q6UXM1 1119 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 ASB18Q6ZVZ8 466 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 MYLK4Q86YV6 388 aaPredicted RBP15.51■□□□□ 0.07
SF3A1-204ENST00000447376 HPS6Q86YV9 775 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 IQCKQ8N0W5 287 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 ARHGEF39Q8N4T4 335 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 TEX9Q8N6V9 391 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 PTGR2Q8N8N7 351 aaPredicted RBP15.51■□□□□ 0.07
SF3A1-204ENST00000447376 ANKRD53Q8N9V6 530 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 MYRIPQ8NFW9 859 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 OR51Q1Q8NH59 317 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 TRIM55Q9BYV6 548 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 COPS7BQ9H9Q2 264 aaPredicted RBP15.51■□□□□ 0.07
SF3A1-204ENST00000447376 CLK4Q9HAZ1 481 aaKnown RBP15.51■□□□□ 0.07
SF3A1-204ENST00000447376 TMEM216Q9P0N5 145 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 SENP1Q9P0U3 644 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 HCN3Q9P1Z3 774 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 C19orf25Q9UFG5 118 aaPredicted RBP15.51■□□□□ 0.07
SF3A1-204ENST00000447376 FBXL4Q9UKA2 621 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 TP53TG5Q9Y2B4 290 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 MRPS2Q9Y399 296 aaKnown RBP15.51■□□□□ 0.07
SF3A1-204ENST00000447376 ZNF451Q9Y4E5 1061 aa15.51■□□□□ 0.07
SF3A1-204ENST00000447376 A6NL46 340 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 PSMD12O00232 456 aaPredicted RBP15.5■□□□□ 0.07
SF3A1-204ENST00000447376 FFAR3O14843 346 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 GPR42O15529 346 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 CLEC3AO75596 197 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 UQCRHP07919 91 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 JAK1P23458 1154 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 ITGA3P26006 1051 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 HNF4AP41235 474 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 AGTR2P50052 363 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 FOXL2P58012 376 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 AP2B1P63010 937 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 MAT1AQ00266 395 aaKnown RBP15.5■□□□□ 0.07
SF3A1-204ENST00000447376 ZNF844Q08AG5 666 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 PCBP2Q15366 365 aaKnown RBP eCLIP15.5■□□□□ 0.07
SF3A1-204ENST00000447376 SYT16Q17RD7 645 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 BEND6Q5SZJ8 279 aaPredicted RBP15.5■□□□□ 0.07
SF3A1-204ENST00000447376 CEP85LQ5SZL2 805 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 TRIM40Q6P9F5 258 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 PRSS41Q7RTY9 318 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 PRICKLE2Q7Z3G6 844 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.5■□□□□ 0.07
SF3A1-204ENST00000447376 GALNT16Q8N428 558 aa15.5■□□□□ 0.07
SF3A1-204ENST00000447376 TEX19Q8NA77 164 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms