RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 APCDD1Q8J025 514 aa16.06■□□□□ 0.16
TCOF1-206ENST00000445265 CPA6Q8N4T0 437 aa16.06■□□□□ 0.16
TCOF1-206ENST00000445265 TMEM80Q96HE8 168 aa16.06■□□□□ 0.16
TCOF1-206ENST00000445265 ABHD14A-ACY1A0A1B0GW23 586 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 DUXAA6NLW8 204 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 RIIAD1A6NNX1 92 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 E2F3O00716 465 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 ORC5O43913 435 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 HMGN1P05114 100 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 C1GALT1C1LP0DN25 315 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 BMXP51813 675 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 TLE2Q04725 743 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 HLA-DQA1Q5Y7H0 255 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 VTCN1Q7Z7D3 282 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 ART5Q96L15 291 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 CAPNS2Q96L46 248 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 PIP5K1AQ99755 562 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 AKAP7Q9P0M2 348 aaPredicted RBP16.05■□□□□ 0.16
TCOF1-206ENST00000445265 TAC3Q9UHF0 121 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 SCN9AQ15858 1988 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 TNFRSF10BO14763 440 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 MPIP34949 423 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 KEAP1Q14145 624 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 ZNF181Q2M3W8 571 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 PTRH1Q86Y79 214 aaKnown RBP16.05■□□□□ 0.16
TCOF1-206ENST00000445265 MFSD6LQ8IWD5 586 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 RBM12BQ8IXT5 1001 aaKnown RBP16.05■□□□□ 0.16
TCOF1-206ENST00000445265 IZUMO1Q8IYV9 350 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 GTF2H4Q92759 462 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 SLAMF8Q9P0V8 285 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 SARDHQ9UL12 918 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 LTBP4Q8N2S1 1624 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.05■□□□□ 0.16
TCOF1-206ENST00000445265 TBC1D3DA0A087WVF3 549 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 TBC1D3IA0A087WXS9 549 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 TBC1D3EA0A087X179 549 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 TBC1D3KA0A087X1G2 549 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 TBC1D3FA6NER0 549 aaPredicted RBP16.05■□□□□ 0.16
TCOF1-206ENST00000445265 TBC1D3LB9A6J9 549 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 SLC35G6P0C7Q6 338 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 TBC1D3HP0C7X1 549 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 UQCRC2P22695 453 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 DCKP27707 260 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 KCNC1P48547 511 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 SPINT3P49223 89 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 PROX2Q3B8N5 592 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 TBC1D3GQ6DHY5 549 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 TBC1D3CQ6IPX1 549 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 TBC1D3Q8IZP1 549 aaPredicted RBP16.05■□□□□ 0.16
TCOF1-206ENST00000445265 C11orf24Q96F05 449 aaPredicted RBP16.05■□□□□ 0.16
TCOF1-206ENST00000445265 ZSCAN32Q9NX65 697 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 KLHL42Q9P2K6 505 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 COMMD3Q9UBI1 195 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 MAGEB3O15480 346 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 CRHBPP24387 322 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 HOXD9P28356 352 aaPredicted RBP16.05■□□□□ 0.16
TCOF1-206ENST00000445265 ALDH3B2P48448 385 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 MANEALQ5VSG8 457 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 LRRTM4Q86VH4 590 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 UXS1Q8NBZ7 420 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 SHKBP1Q8TBC3 707 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 APIPQ96GX9 242 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 RTP3Q9BQQ7 232 aa16.05■□□□□ 0.16
TCOF1-206ENST00000445265 SCAMP2O15127 329 aaKnown RBP16.04■□□□□ 0.16
TCOF1-206ENST00000445265 ATE1O95260 518 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 APODP05090 189 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 CCT3P49368 545 aaKnown RBP16.04■□□□□ 0.16
TCOF1-206ENST00000445265 RPS3AP61247 264 aaKnown RBP16.04■□□□□ 0.16
TCOF1-206ENST00000445265 HSF5Q4G112 596 aaPredicted RBP16.04■□□□□ 0.16
TCOF1-206ENST00000445265 CTSL3PQ5NE16 218 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 CRTC1Q6UUV9 634 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 TSPAN33Q86UF1 283 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 DCUN1D3Q8IWE4 304 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 FAM98AQ8NCA5 519 aaKnown RBP16.04■□□□□ 0.16
TCOF1-206ENST00000445265 OR10G6Q8NH81 332 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 GRPEL2Q8TAA5 225 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 TP53INP1Q96A56 240 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 FEVQ99581 238 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 BHLHE41Q9C0J9 482 aaPredicted RBP16.04■□□□□ 0.16
TCOF1-206ENST00000445265 GMPR2Q9P2T1 348 aaKnown RBP16.04■□□□□ 0.16
TCOF1-206ENST00000445265 ENPP5Q9UJA9 477 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 B4GAT1O43505 415 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 HIST1H2ABP04908 130 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 ETV3P41162 512 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 BIKQ13323 160 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 APOFQ13790 326 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 VEZF1Q14119 521 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 HIST3H2AQ7L7L0 130 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 ANKRD13BQ86YJ7 626 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 METTL25Q8N6Q8 603 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 DNASE1L2Q92874 299 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 HIST1H2ACQ93077 130 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 LRIG1Q96JA1 1093 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 INPP5KQ9BT40 448 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 MRPS30Q9NP92 439 aaKnown RBP16.04■□□□□ 0.16
TCOF1-206ENST00000445265 MRPS33Q9Y291 106 aaKnown RBP16.04■□□□□ 0.16
TCOF1-206ENST00000445265 A0A0G2JN53 185 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 FUOMA2VDF0 154 aa16.04■□□□□ 0.16
TCOF1-206ENST00000445265 AKAP8O43823 692 aaKnown RBP16.04■□□□□ 0.16
TCOF1-206ENST00000445265 AOC2O75106 756 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms