RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 ITGAMP11215 1152 aa18.94■□□□□ 0.62
LRCH3-208ENST00000443727 JAK1P23458 1154 aa18.94■□□□□ 0.62
LRCH3-208ENST00000443727 SOX11P35716 441 aa18.94■□□□□ 0.62
LRCH3-208ENST00000443727 TSFMP43897 325 aaKnown RBP18.94■□□□□ 0.62
LRCH3-208ENST00000443727 RAB8AP61006 207 aa18.94■□□□□ 0.62
LRCH3-208ENST00000443727 OLR1P78380 273 aa18.94■□□□□ 0.62
LRCH3-208ENST00000443727 ACTN3Q08043 901 aaPredicted RBP18.94■□□□□ 0.62
LRCH3-208ENST00000443727 ABRAXAS2Q15018 415 aa18.94■□□□□ 0.62
LRCH3-208ENST00000443727 BTBD16Q32M84 506 aa18.94■□□□□ 0.62
LRCH3-208ENST00000443727 ABHD17BQ5VST6 288 aa18.94■□□□□ 0.62
LRCH3-208ENST00000443727 ANKRD37Q7Z713 158 aa18.94■□□□□ 0.62
LRCH3-208ENST00000443727 SNX31Q8N9S9 440 aa18.94■□□□□ 0.62
LRCH3-208ENST00000443727 ANKRD53Q8N9V6 530 aa18.94■□□□□ 0.62
LRCH3-208ENST00000443727 CATSPER1Q8NEC5 780 aa18.94■□□□□ 0.62
LRCH3-208ENST00000443727 OR1N1Q8NGS0 311 aa18.94■□□□□ 0.62
LRCH3-208ENST00000443727 FBF1Q8TES7 1133 aa18.94■□□□□ 0.62
LRCH3-208ENST00000443727 ZNF592Q92610 1267 aa18.94■□□□□ 0.62
LRCH3-208ENST00000443727 TBC1D20Q96BZ9 403 aa18.94■□□□□ 0.62
LRCH3-208ENST00000443727 IMMP1LQ96LU5 166 aa18.94■□□□□ 0.62
LRCH3-208ENST00000443727 CAPS2Q9BXY5 557 aa18.94■□□□□ 0.62
LRCH3-208ENST00000443727 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.94■□□□□ 0.62
LRCH3-208ENST00000443727 CD274Q9NZQ7 290 aa18.94■□□□□ 0.62
LRCH3-208ENST00000443727 TEKT2Q9UIF3 430 aa18.94■□□□□ 0.62
LRCH3-208ENST00000443727 COL12A1Q99715 3063 aa18.94■□□□□ 0.62
LRCH3-208ENST00000443727 SHANK1Q9Y566 2161 aa18.93■□□□□ 0.62
LRCH3-208ENST00000443727 SCN3AQ9NY46 2000 aa18.93■□□□□ 0.62
LRCH3-208ENST00000443727 A8MUI8 341 aa18.93■□□□□ 0.62
LRCH3-208ENST00000443727 CHST10O43529 356 aa18.93■□□□□ 0.62
LRCH3-208ENST00000443727 FAM155BO75949 473 aa18.93■□□□□ 0.62
LRCH3-208ENST00000443727 WISP3O95389 354 aaPredicted RBP18.93■□□□□ 0.62
LRCH3-208ENST00000443727 B3GALT4O96024 378 aa18.93■□□□□ 0.62
LRCH3-208ENST00000443727 FHP07954 510 aa18.93■□□□□ 0.62
LRCH3-208ENST00000443727 C1GALT1C1LP0DN25 315 aa18.93■□□□□ 0.62
LRCH3-208ENST00000443727 CD1DP15813 335 aa18.93■□□□□ 0.62
LRCH3-208ENST00000443727 SLC6A12P48065 614 aa18.93■□□□□ 0.62
LRCH3-208ENST00000443727 TOR1AIP1Q5JTV8 583 aa18.93■□□□□ 0.62
LRCH3-208ENST00000443727 SULT1C3Q6IMI6 304 aa18.93■□□□□ 0.62
LRCH3-208ENST00000443727 KRT78Q8N1N4 520 aa18.93■□□□□ 0.62
LRCH3-208ENST00000443727 UTP15Q8TED0 518 aaKnown RBP18.93■□□□□ 0.62
LRCH3-208ENST00000443727 CCT6BQ92526 530 aa18.93■□□□□ 0.62
LRCH3-208ENST00000443727 EXT2Q93063 718 aa18.93■□□□□ 0.62
LRCH3-208ENST00000443727 PRM3Q9NNZ6 103 aa18.93■□□□□ 0.62
LRCH3-208ENST00000443727 DNAJC11Q9NVH1 559 aa18.93■□□□□ 0.62
LRCH3-208ENST00000443727 RNF112Q9ULX5 631 aa18.93■□□□□ 0.62
LRCH3-208ENST00000443727 NTNG1Q9Y2I2 539 aa18.93■□□□□ 0.62
LRCH3-208ENST00000443727 ANKUB1A6NFN9 424 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 PSMD12O00232 456 aaPredicted RBP18.92■□□□□ 0.62
LRCH3-208ENST00000443727 CLGNO14967 610 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 B4GALT2O60909 372 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 CBX6O95503 412 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 SERPINA6P08185 405 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 ZNF33BQ06732 778 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 NAB1Q13506 487 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 SLBPQ14493 270 aaKnown RBP eCLIP18.92■□□□□ 0.62
LRCH3-208ENST00000443727 OR4D1Q15615 310 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 ZKSCAN8Q15776 578 aaPredicted RBP18.92■□□□□ 0.62
LRCH3-208ENST00000443727 SFT2D3Q587I9 215 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 CDKL4Q5MAI5 379 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 PLAG1Q6DJT9 500 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 TMIGD1Q6UXZ0 262 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 SLCO4C1Q6ZQN7 724 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 KLHDC8AQ8IYD2 350 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 TTLQ8NG68 377 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 GRHL3Q8TE85 626 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 FAR2Q96K12 515 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 LRRC1Q9BTT6 524 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 SLC6A16Q9GZN6 736 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 RHBGQ9H310 441 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 LANCL2Q9NS86 450 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 STMN3Q9NZ72 180 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 USP9XQ93008 2570 aaPredicted RBP18.92■□□□□ 0.62
LRCH3-208ENST00000443727 ESPL1Q14674 2120 aa18.92■□□□□ 0.62
LRCH3-208ENST00000443727 TRAV17A0A0B4J275 112 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 BLACEA4D250 179 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 CTAGE15A4D2H0 777 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 MAGEB17A8MXT2 336 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 STK16O75716 305 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 F10P00742 488 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 C1QAP02745 245 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 CRABP2P29373 138 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 HSPA7P48741 367 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 OR4D2P58180 307 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 STXBP1P61764 594 aaKnown RBP18.91■□□□□ 0.62
LRCH3-208ENST00000443727 RHAGQ02094 409 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 GUCY2DQ02846 1103 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 EXT1Q16394 746 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 WHAMMP3Q1A5X7 153 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 FBXO48Q5FWF7 155 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 FAM180AQ6UWF9 173 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 CMC1Q7Z7K0 106 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 TBC1D1Q86TI0 1168 aaPredicted RBP18.91■□□□□ 0.62
LRCH3-208ENST00000443727 CTAGE6Q86UF2 777 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.91■□□□□ 0.62
LRCH3-208ENST00000443727 PLPP5Q8NEB5 264 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 SUN3Q8TAQ9 357 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 HAS2Q92819 552 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 TSLPQ969D9 159 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 KIAA1191Q96A73 305 aa18.91■□□□□ 0.62
LRCH3-208ENST00000443727 MRRFQ96E11 262 aaKnown RBP18.91■□□□□ 0.62
LRCH3-208ENST00000443727 LPAR4Q99677 370 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms