RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 OR2B3O76000 313 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 NTRK1P04629 796 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 HTR1AP08908 422 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 EPB42P16452 691 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 JUNBP17275 347 aaPredicted RBP7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 SLC7A2P52569 658 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 SLC9A5Q14940 896 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 CYP2A13Q16696 494 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 AGKQ53H12 422 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 PAGE3Q5JUK9 113 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 SAMD4BQ5PRF9 694 aaKnown RBP7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 GALNT4Q8N4A0 578 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 TRPC4APQ8TEL6 797 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 ISOC1Q96CN7 298 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 KCNA7Q96RP8 456 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 SLC30A3Q99726 388 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 HOPXQ9BPY8 73 aaPredicted RBP7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 CCDC167Q9P0B6 97 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 SLAMF8Q9P0V8 285 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 RSL24D1Q9UHA3 163 aaKnown RBP7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 TICRRQ7Z2Z1 1910 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 IQCF5A8MTL0 148 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 MRASO14807 208 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 NUDT21O43809 227 aaKnown RBP7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 TIPRLO75663 272 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 ATE1O95260 518 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 RBP1P09455 135 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 PRSS56P0CW18 603 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 ITIH1P19827 911 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 CD247P20963 164 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 PRDX3P30048 256 aaKnown RBP7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 GRIA3P42263 894 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 MC1RQ01726 317 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 DPTQ07507 201 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 NDUFA9Q16795 377 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 FAM83EQ2M2I3 478 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 RNF165Q6ZSG1 346 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 C17orf64Q86WR6 236 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 CBARPQ8N350 705 aaPredicted RBP7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 DPP10Q8N608 796 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 ZBTB2Q8N680 514 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 ADAMTS14Q8WXS8 1223 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 FKBP10Q96AY3 582 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 ECHDC3Q96DC8 303 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 OR6C1Q96RD1 312 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 MCCC1Q96RQ3 725 aaPredicted RBP7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 RAB11FIP5Q9BXF6 653 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 RPF2Q9H7B2 306 aaKnown RBP7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 MVB12BQ9H7P6 319 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 LIN28AQ9H9Z2 209 aaKnown RBP7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 CROTQ9UKG9 612 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 PADI1Q9ULC6 663 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 USP22Q9UPT9 525 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 BTN3A1O00481 513 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 PIP5K1BO14986 540 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 ARPC2O15144 300 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 AP2A2O94973 939 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 CCNDBP1O95273 360 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 SIX3O95343 332 aaPredicted RBP7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 ESR1P03372 595 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 CKMT1AP12532 417 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 TCN1P20061 433 aaPredicted RBP7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 CDH15P55291 814 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 ISXQ2M1V0 245 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 AGAP9Q5VTM2 703 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 CLYBLQ8N0X4 340 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 ATL1Q8WXF7 558 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 LRRC58Q96CX6 371 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 CSF3RQ99062 836 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 TCF12Q99081 682 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 NUDT22Q9BRQ3 303 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 AARSD1Q9BTE6 412 aaKnown RBP7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 BTBD2Q9BX70 525 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 TFB2MQ9H5Q4 396 aaKnown RBP7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 AIG1Q9NVV5 245 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 IFT80Q9P2H3 777 aaPredicted RBP7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 PADI2Q9Y2J8 665 aa7.09□□□□□ -1.27
CDC42BPA-208ENST00000442054 CFLARO15519 480 aa7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 HNRNPRO43390 633 aaKnown RBP7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZNF821O75541 412 aaPredicted RBP7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 CALRP27797 417 aaKnown RBP7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 OTX2P32243 289 aa7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 GZMMP51124 257 aa7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 MLLT10P55197 1068 aa7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 TGM3Q08188 693 aa7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZBED5Q49AG3 693 aa7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 C1orf189Q5VU69 101 aa7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 PRICKLE2Q7Z3G6 844 aa7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZNF687Q8N1G0 1237 aa7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 TEX19Q8NA77 164 aa7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 TBC1D15Q8TC07 691 aa7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 USP7Q93009 1102 aa7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 KIAA1191Q96A73 305 aa7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 DERL2Q9GZP9 239 aa7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 ATG10Q9H0Y0 220 aa7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 Q9H521 79 aa7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 CLK4Q9HAZ1 481 aaKnown RBP7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 NLE1Q9NVX2 485 aaPredicted RBP7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 RNF112Q9ULX5 631 aa7.09□□□□□ -1.28
CDC42BPA-208ENST00000442054 RAXQ9Y2V3 346 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms