RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 C9orf62Q8N4C0 152 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 BLOC1S5Q8TDH9 187 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 RIT1Q92963 219 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 ZYG11BQ9C0D3 744 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 CD274Q9NZQ7 290 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 ZMYM5Q9UJ78 669 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 OR1I1O60431 355 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 TLR5O60602 858 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 VNN2O95498 520 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 RORCP51449 518 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 SSX1Q16384 188 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 CYP27C1Q4G0S4 372 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 MARC1Q5VT66 337 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 ATCAYQ86WG3 371 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 ZNF680Q8NEM1 530 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 FUBP1Q96AE4 644 aaKnown RBP16.19■□□□□ 0.18
PMS1-213ENST00000441310 FUBP3Q96I24 572 aaKnown RBP eCLIP16.19■□□□□ 0.18
PMS1-213ENST00000441310 FERD3LQ96RJ6 166 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 THSD7BQ9C0I4 1608 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 GLP2RO95838 553 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 ADRA2AP08913 450 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 OR1E1P30953 314 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 SOX3P41225 446 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 GNPDA1P46926 289 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 CLCN7P51798 805 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 PER3P56645 1201 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 BTN1A1Q13410 526 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 KIF18BQ86Y91 864 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 OR52E4Q8NGH9 312 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 FBXW5Q969U6 566 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 MARC2Q969Z3 335 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 TNPO3Q9Y5L0 923 aaKnown RBP16.19■□□□□ 0.18
PMS1-213ENST00000441310 FAM220BPB1ANY3 271 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 HOXC13P31276 330 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 UBE3AQ05086 875 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 ABRAXAS2Q15018 415 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.18■□□□□ 0.18
PMS1-213ENST00000441310 C18orf21Q32NC0 220 aaPredicted RBP16.18■□□□□ 0.18
PMS1-213ENST00000441310 WDR36Q8NI36 951 aaKnown RBP16.18■□□□□ 0.18
PMS1-213ENST00000441310 PHF21AQ96BD5 680 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 CCM2Q9BSQ5 444 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 SPON2Q9BUD6 331 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 MCCC2Q9HCC0 563 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 MS4A12Q9NXJ0 267 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 MALT1Q9UDY8 824 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 ATP6V1HQ9UI12 483 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 ATPIF1Q9UII2 106 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 SAMD4AQ9UPU9 718 aaKnown RBP16.18■□□□□ 0.18
PMS1-213ENST00000441310 TOR1AO14656 332 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 MYL12BO14950 172 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 INPPL1O15357 1258 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 C1QCP02747 245 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 GALTP07902 379 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 MYL12AP19105 171 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 DSTNP60981 165 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 TEKQ02763 1124 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 AANATQ16613 207 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 SGO1Q5FBB7 561 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 ANKRD54Q6NXT1 300 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 TEX261Q6UWH6 196 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 PRSS42Q7Z5A4 293 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 TLR8Q9NR97 1041 aaKnown RBP16.18■□□□□ 0.18
PMS1-213ENST00000441310 U3KQ87 197 aa16.18■□□□□ 0.18
PMS1-213ENST00000441310 IFRD1O00458 451 aaPredicted RBP16.17■□□□□ 0.18
PMS1-213ENST00000441310 SYN3O14994 580 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 BET1O15155 118 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 VPS26AO75436 327 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 OR1D2P34982 312 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 MAP2K3P46734 347 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 WSCD2Q2TBF2 565 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 B3GNT7Q8NFL0 401 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 EXOC2Q96KP1 924 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 DEFB118Q96PH6 123 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 NYNRINQ9P2P1 1898 aaKnown RBP16.17■□□□□ 0.18
PMS1-213ENST00000441310 A0A0D9SEW6 157 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 FFAR3O14843 346 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 GPR42O15529 346 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 PEX11BO96011 259 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 GGT2P36268 569 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 MAN2A2P49641 1150 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 HMGCS1Q01581 520 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 TOR1AIP1Q5JTV8 583 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 ZNF367Q7RTV3 350 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 LIX1Q8N485 282 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 LPCAT1Q8NF37 534 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 TPD52L3Q96J77 140 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 GKN1Q9NS71 199 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 PLCXD1Q9NUJ7 323 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 UXTQ9UBK9 157 aaPredicted RBP16.17■□□□□ 0.18
PMS1-213ENST00000441310 SLC6A14Q9UN76 642 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 FAM240BA0A1B0GVZ2 78 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.17■□□□□ 0.18
PMS1-213ENST00000441310 A0A1W2PQL4 384 aaPredicted RBP16.17■□□□□ 0.18
PMS1-213ENST00000441310 TMEM189-UBE2V1I3L0A0 370 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 WWP2O00308 870 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 FABP7O15540 132 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 CYP17A1P05093 508 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 COL6A1P12109 1028 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 CHMP24386 653 aa16.17■□□□□ 0.18
PMS1-213ENST00000441310 SRP54P61011 504 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms