RNA–Protein interactions for RNA: ENST00000440223.5

UBE2F-214, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 830 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-214ENST00000440223 ZNF248Q8NDW4 579 aa15.33■□□□□ 0.04
UBE2F-214ENST00000440223 OR4K1Q8NGD4 311 aa15.33■□□□□ 0.04
UBE2F-214ENST00000440223 HUS1BQ8NHY5 278 aa15.33■□□□□ 0.04
UBE2F-214ENST00000440223 DCBLD2Q96PD2 775 aa15.33■□□□□ 0.04
UBE2F-214ENST00000440223 HBEGFQ99075 208 aa15.33■□□□□ 0.04
UBE2F-214ENST00000440223 NRTNQ99748 197 aa15.33■□□□□ 0.04
UBE2F-214ENST00000440223 ACPTQ9BZG2 426 aa15.33■□□□□ 0.04
UBE2F-214ENST00000440223 SLC6A20Q9NP91 592 aa15.33■□□□□ 0.04
UBE2F-214ENST00000440223 FARSBQ9NSD9 589 aaKnown RBP15.33■□□□□ 0.04
UBE2F-214ENST00000440223 NOP53Q9NZM5 478 aaKnown RBP15.33■□□□□ 0.04
UBE2F-214ENST00000440223 PPT2Q9UMR5 302 aa15.33■□□□□ 0.04
UBE2F-214ENST00000440223 SLC12A4Q9UP95 1085 aa15.33■□□□□ 0.04
UBE2F-214ENST00000440223 TMED5Q9Y3A6 229 aa15.33■□□□□ 0.04
UBE2F-214ENST00000440223 WDFY3Q8IZQ1 3526 aa15.33■□□□□ 0.04
UBE2F-214ENST00000440223 NPIPB8E9PQR5 432 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 LSM1O15116 133 aaKnown RBP15.32■□□□□ 0.04
UBE2F-214ENST00000440223 OR1F1O43749 312 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 HNRNPCL1O60812 293 aaKnown RBP15.32■□□□□ 0.04
UBE2F-214ENST00000440223 SEC22BO75396 215 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 RASSF9O75901 435 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 ATP5HO75947 161 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 NEK2P51955 445 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 RAB15P59190 212 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 RPS15AP62244 130 aaKnown RBP15.32■□□□□ 0.04
UBE2F-214ENST00000440223 RPL38P63173 70 aaKnown RBP15.32■□□□□ 0.04
UBE2F-214ENST00000440223 HMGCS1Q01581 520 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 MEF2AQ02078 507 aaPredicted RBP15.32■□□□□ 0.04
UBE2F-214ENST00000440223 EMX2Q04743 252 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 KRT72Q14CN4 511 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 C6orf136Q5SQH8 315 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 LRRC69Q6ZNQ3 347 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 PRSS42Q7Z5A4 293 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 YTHDF3Q7Z739 585 aaKnown RBP15.32■□□□□ 0.04
UBE2F-214ENST00000440223 MIER2Q8N344 545 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 CPSF7Q8N684 471 aaKnown RBP15.32■□□□□ 0.04
UBE2F-214ENST00000440223 OR2T11Q8NH01 316 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 ZUFSPQ96AP4 578 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 OR2A14Q96R47 310 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 CD180Q99467 661 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 MTERF1Q99551 399 aaKnown RBP15.32■□□□□ 0.04
UBE2F-214ENST00000440223 B3GNT4Q9C0J1 378 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 TWSG1Q9GZX9 223 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 RHBGQ9H310 441 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 DMRT3Q9NQL9 472 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 VPS29Q9UBQ0 182 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 POMT2Q9UKY4 750 aa15.32■□□□□ 0.04
UBE2F-214ENST00000440223 EFCAB7A8K855 629 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 B4E171 279 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 NVLO15381 856 aaKnown RBP15.31■□□□□ 0.04
UBE2F-214ENST00000440223 MAP3K7O43318 606 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 UBOX5O94941 541 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 CDH3P22223 829 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 PTX3P26022 381 aaPredicted RBP15.31■□□□□ 0.04
UBE2F-214ENST00000440223 PRDX6P30041 224 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 SLC5A2P31639 672 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 AHRP35869 848 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 EIF2S3P41091 472 aaKnown RBP15.31■□□□□ 0.04
UBE2F-214ENST00000440223 ETV5P41161 510 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 TSPAN7P41732 249 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 ACSM2AQ08AH3 577 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 UBAP2LQ14157 1087 aaKnown RBP15.31■□□□□ 0.04
UBE2F-214ENST00000440223 SPIN4Q56A73 249 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 KIAA1614Q5VZ46 1190 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 TMEM198Q66K66 360 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 ACSM2BQ68CK6 577 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 ZNF425Q6IV72 752 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 Q6ZSR9 355 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.31■□□□□ 0.04
UBE2F-214ENST00000440223 CMTM5Q96DZ9 223 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 THAP11Q96EK4 314 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 TAAR9Q96RI9 348 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 ZNF768Q9H5H4 540 aaKnown RBP15.31■□□□□ 0.04
UBE2F-214ENST00000440223 ASIC5Q9NY37 505 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 AHSPQ9NZD4 102 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 ARMCX1Q9P291 453 aa15.31■□□□□ 0.04
UBE2F-214ENST00000440223 RUVBL1Q9Y265 456 aaKnown RBP15.31■□□□□ 0.04
UBE2F-214ENST00000440223 POLR3HQ9Y535 204 aaPredicted RBP15.31■□□□□ 0.04
UBE2F-214ENST00000440223 COPG1Q9Y678 874 aaKnown RBP15.31■□□□□ 0.04
UBE2F-214ENST00000440223 A0A087WV48 116 aa15.3■□□□□ 0.04
UBE2F-214ENST00000440223 TLCD2A6NGC4 264 aa15.3■□□□□ 0.04
UBE2F-214ENST00000440223 MAGEB17A8MXT2 336 aa15.3■□□□□ 0.04
UBE2F-214ENST00000440223 CLEC3AO75596 197 aa15.3■□□□□ 0.04
UBE2F-214ENST00000440223 PRPS2P11908 318 aa15.3■□□□□ 0.04
UBE2F-214ENST00000440223 CCL4P13236 92 aa15.3■□□□□ 0.04
UBE2F-214ENST00000440223 ACPPP15309 386 aa15.3■□□□□ 0.04
UBE2F-214ENST00000440223 CD82P27701 267 aa15.3■□□□□ 0.04
UBE2F-214ENST00000440223 GRIA3P42263 894 aa15.3■□□□□ 0.04
UBE2F-214ENST00000440223 SCTRP47872 440 aa15.3■□□□□ 0.04
UBE2F-214ENST00000440223 RASSF2P50749 326 aa15.3■□□□□ 0.04
UBE2F-214ENST00000440223 MNAT1P51948 309 aa15.3■□□□□ 0.04
UBE2F-214ENST00000440223 RAP1GDS1P52306 607 aa15.3■□□□□ 0.04
UBE2F-214ENST00000440223 ADAMTS20P59510 1910 aa15.3■□□□□ 0.04
UBE2F-214ENST00000440223 RPS13P62277 151 aaKnown RBP15.3■□□□□ 0.04
UBE2F-214ENST00000440223 KLF10Q13118 480 aa15.3■□□□□ 0.04
UBE2F-214ENST00000440223 PDCD4Q53EL6 469 aaKnown RBP15.3■□□□□ 0.04
UBE2F-214ENST00000440223 CROCCQ5TZA2 2017 aa15.3■□□□□ 0.04
UBE2F-214ENST00000440223 FAM219BQ5XKK7 198 aa15.3■□□□□ 0.04
UBE2F-214ENST00000440223 CYB5D1Q6P9G0 228 aa15.3■□□□□ 0.04
UBE2F-214ENST00000440223 FIGLAQ6QHK4 219 aa15.3■□□□□ 0.04
UBE2F-214ENST00000440223 FAM92BQ6ZTR7 304 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms