RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SLC39A12Q504Y0 691 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 HSP90AA5PQ58FG0 334 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 PDPK2PQ6A1A2 396 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 DHRS13Q6UX07 377 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 KIAA1324Q6UXG2 1013 aaKnown RBP3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM43BQ6ZT52 329 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 SCD5Q86SK9 330 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 MON1AQ86VX9 555 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 ARHGAP12Q8IWW6 846 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 KLHDC8BQ8IXV7 354 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 ARHGAP24Q8N264 748 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 DCLK2Q8N568 766 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 ATPAF2Q8N5M1 289 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 ATP6V0D2Q8N8Y2 350 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 SMRP1Q8NCR6 262 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 CFAP61Q8NHU2 1237 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 SPATA3Q8NHX4 192 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 RDH11Q8TC12 318 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 AGAP11Q8TF27 550 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 CASP10Q92851 521 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 GLT1D1Q96MS3 346 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 TSNARE1Q96NA8 513 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 SERPINB11Q96P15 392 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 IL12RB2Q99665 862 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 NPAS1Q99742 590 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 TBL1YQ9BQ87 522 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 APOL2Q9BQE5 337 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 CCDC106Q9BWC9 280 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 TBC1D10AQ9BXI6 508 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 FTHL17Q9BXU8 183 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZYG11BQ9C0D3 744 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 RBM38Q9H0Z9 239 aaKnown RBP3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 TRPV6Q9H1D0 765 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 TTYH1Q9H313 450 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 MMADHCQ9H3L0 296 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 FBXO44Q9H4M3 255 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 EBF2Q9HAK2 575 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 NMUR1Q9HB89 426 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 MRM3Q9HC36 420 aaKnown RBP3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 MOV10Q9HCE1 1003 aaKnown RBP3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 ENTPD7Q9NQZ7 604 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 FBXO6Q9NRD1 293 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 CHRAC1Q9NRG0 131 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 IARS2Q9NSE4 1012 aaKnown RBP3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 TBC1D13Q9NVG8 400 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 RBM22Q9NW64 420 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 BEX4Q9NWD9 120 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 COMMD8Q9NX08 183 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 RNF186Q9NXI6 227 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 DONSONQ9NYP3 566 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 TMEM216Q9P0N5 145 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 COPG2Q9UBF2 871 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 GIMAP2Q9UG22 337 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 CD207Q9UJ71 328 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 EMCNQ9ULC0 261 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 SCML2Q9UQR0 700 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 HBS1LQ9Y450 684 aaKnown RBP3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 EP400Q96L91 3159 aa3.36□□□□□ -1.87
HMGB3P11-201ENST00000440127 CCDC187A0A096LP49 1063 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 TRBV5-3A0A0A0MS03 114 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 hCG_1807616A0A1W2PRN6 198 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 GAGE10A6NGK3 116 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 SH2D7A6NKC9 451 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 OR6C75A6NL08 312 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 E9PAM4 449 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 G3V2L1 256 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 MSI1O43347 362 aaKnown RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 SMAD6O43541 496 aaKnown RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 ITM2AO43736 263 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 MAGEC1O60732 1142 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 DIAPH2O60879 1101 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 GUCY1B2O75343 617 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 LYPLA1O75608 230 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 CIB2O75838 187 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 NDUFB8O95169 186 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 ANP32DO95626 131 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 HSPA4LO95757 839 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 MOCS2O96007 188 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 MT-CYBP00156 380 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 GSRP00390 522 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 MBPP02686 304 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 HLA-DQB2P05538 268 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 C2P06681 752 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 HSPA1AP0DMV8 641 aaKnown RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 HSPA1BP0DMV9 641 aaKnown RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 UBL4AP11441 157 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 SAT1P21673 171 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 YWHAQP27348 245 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 CRABP2P29373 138 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 ADRA1AP35348 466 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 MAGEA11P43364 429 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 PGFP49763 221 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 CCNG1P51959 295 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 NDST2P52849 883 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 TAS2R50P59544 299 aa3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 KRTAP10-7P60409 375 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 ABCE1P61221 599 aaKnown RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 RPS3AP61247 264 aaKnown RBP3.35□□□□□ -1.87
HMGB3P11-201ENST00000440127 CREB5Q02930 508 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms