RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 UGT8Q16880 541 aa16.8■□□□□ 0.28
CCDC188-201ENST00000439765 MRPL14Q6P1L8 145 aaKnown RBP16.8■□□□□ 0.28
CCDC188-201ENST00000439765 SHISA6Q6ZSJ9 500 aa16.8■□□□□ 0.28
CCDC188-201ENST00000439765 LRRC70Q7Z2Q7 622 aa16.8■□□□□ 0.28
CCDC188-201ENST00000439765 TBC1D19Q8N5T2 526 aa16.8■□□□□ 0.28
CCDC188-201ENST00000439765 KCT2Q8NC54 265 aa16.8■□□□□ 0.28
CCDC188-201ENST00000439765 CAMKVQ8NCB2 501 aa16.8■□□□□ 0.28
CCDC188-201ENST00000439765 SLC13A3Q8WWT9 602 aa16.8■□□□□ 0.28
CCDC188-201ENST00000439765 COL26A1Q96A83 441 aa16.8■□□□□ 0.28
CCDC188-201ENST00000439765 FKBP10Q96AY3 582 aa16.8■□□□□ 0.28
CCDC188-201ENST00000439765 THAP11Q96EK4 314 aa16.8■□□□□ 0.28
CCDC188-201ENST00000439765 CD244Q9BZW8 370 aa16.8■□□□□ 0.28
CCDC188-201ENST00000439765 ZNF304Q9HCX3 659 aa16.8■□□□□ 0.28
CCDC188-201ENST00000439765 TMCO1Q9UM00 188 aa16.8■□□□□ 0.28
CCDC188-201ENST00000439765 POLHQ9Y253 713 aa16.8■□□□□ 0.28
CCDC188-201ENST00000439765 BPGMP07738 259 aa16.79■□□□□ 0.28
CCDC188-201ENST00000439765 IL1RNP18510 177 aa16.79■□□□□ 0.28
CCDC188-201ENST00000439765 OTX2P32243 289 aa16.79■□□□□ 0.28
CCDC188-201ENST00000439765 FOLR3P41439 243 aa16.79■□□□□ 0.28
CCDC188-201ENST00000439765 KCNC4Q03721 635 aa16.79■□□□□ 0.28
CCDC188-201ENST00000439765 SLBPQ14493 270 aaKnown RBP eCLIP16.79■□□□□ 0.28
CCDC188-201ENST00000439765 PCLAFQ15004 111 aa16.79■□□□□ 0.28
CCDC188-201ENST00000439765 RBBP5Q15291 538 aaKnown RBP16.79■□□□□ 0.28
CCDC188-201ENST00000439765 GARNL3Q5VVW2 1013 aa16.79■□□□□ 0.28
CCDC188-201ENST00000439765 PRMT9Q6P2P2 845 aa16.79■□□□□ 0.28
CCDC188-201ENST00000439765 SLCO4C1Q6ZQN7 724 aa16.79■□□□□ 0.28
CCDC188-201ENST00000439765 PRSS41Q7RTY9 318 aa16.79■□□□□ 0.28
CCDC188-201ENST00000439765 ANKRD53Q8N9V6 530 aa16.79■□□□□ 0.28
CCDC188-201ENST00000439765 C9orf43Q8TAL5 461 aaPredicted RBP16.79■□□□□ 0.28
CCDC188-201ENST00000439765 UBTD2Q8WUN7 234 aa16.79■□□□□ 0.28
CCDC188-201ENST00000439765 MOCOSQ96EN8 888 aa16.79■□□□□ 0.28
CCDC188-201ENST00000439765 MMABQ96EY8 250 aaPredicted RBP16.79■□□□□ 0.28
CCDC188-201ENST00000439765 PAIP2Q9BPZ3 127 aaKnown RBP16.79■□□□□ 0.28
CCDC188-201ENST00000439765 SARGQ9BW04 601 aa16.79■□□□□ 0.28
CCDC188-201ENST00000439765 TRIM4Q9C037 500 aa16.79■□□□□ 0.28
CCDC188-201ENST00000439765 INTS9Q9NV88 658 aaKnown RBP16.79■□□□□ 0.28
CCDC188-201ENST00000439765 OPTCQ9UBM4 332 aa16.79■□□□□ 0.28
CCDC188-201ENST00000439765 MAN2B2Q9Y2E5 1009 aa16.79■□□□□ 0.28
CCDC188-201ENST00000439765 KCNMB2Q9Y691 235 aa16.79■□□□□ 0.28
CCDC188-201ENST00000439765 HECTD1Q9ULT8 2610 aa16.79■□□□□ 0.28
CCDC188-201ENST00000439765 SCN2AQ99250 2005 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 LRRK2Q5S007 2527 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 A8MT66 165 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 BIRC5O15392 142 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 FOXS1O43638 330 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 C1GALT1C1LP0DN25 315 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 PIM1P11309 404 aaPredicted RBP16.78■□□□□ 0.28
CCDC188-201ENST00000439765 EPORP19235 508 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 SCTRP47872 440 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 SETDB1Q15047 1291 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 NDUFA9Q16795 377 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 ATG9BQ674R7 924 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 TMEM214Q6NUQ4 689 aaKnown RBP16.78■□□□□ 0.28
CCDC188-201ENST00000439765 OVCH1Q7RTY7 1134 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 SLC22A9Q8IVM8 553 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 C10orf107Q8IVU9 208 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.78■□□□□ 0.28
CCDC188-201ENST00000439765 PRSS58Q8IYP2 241 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 OR9A4Q8NGU2 314 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 OR2Y1Q8NGV0 311 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 TM4SF19Q96DZ7 209 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 CCDC126Q96EE4 140 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 PHF21BQ96EK2 531 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 MVB12AQ96EY5 273 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 ABHD17AQ96GS6 310 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 MECRQ9BV79 373 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 SOX17Q9H6I2 414 aaPredicted RBP16.78■□□□□ 0.28
CCDC188-201ENST00000439765 OXSMQ9NWU1 459 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 GPRC5BQ9NZH0 403 aa16.78■□□□□ 0.28
CCDC188-201ENST00000439765 WDR91A4D1P6 747 aa16.77■□□□□ 0.28
CCDC188-201ENST00000439765 LRRC14BA6NHZ5 514 aa16.77■□□□□ 0.28
CCDC188-201ENST00000439765 CLGNO14967 610 aa16.77■□□□□ 0.28
CCDC188-201ENST00000439765 PRAMEF4O60810 478 aa16.77■□□□□ 0.28
CCDC188-201ENST00000439765 ALDH3A1P30838 453 aa16.77■□□□□ 0.28
CCDC188-201ENST00000439765 ALDH18A1P54886 795 aaKnown RBP16.77■□□□□ 0.28
CCDC188-201ENST00000439765 DSG2Q14126 1118 aa16.77■□□□□ 0.28
CCDC188-201ENST00000439765 NKG7Q16617 165 aa16.77■□□□□ 0.28
CCDC188-201ENST00000439765 XKR6Q5GH73 641 aa16.77■□□□□ 0.28
CCDC188-201ENST00000439765 PRAMEF9Q5VWM5 478 aa16.77■□□□□ 0.28
CCDC188-201ENST00000439765 CPZQ66K79 652 aa16.77■□□□□ 0.28
CCDC188-201ENST00000439765 NUDCD3Q8IVD9 361 aa16.77■□□□□ 0.28
CCDC188-201ENST00000439765 PTGR2Q8N8N7 351 aaPredicted RBP16.77■□□□□ 0.28
CCDC188-201ENST00000439765 AMER3Q8N944 861 aa16.77■□□□□ 0.28
CCDC188-201ENST00000439765 ADAMTS17Q8TE56 1095 aa16.77■□□□□ 0.28
CCDC188-201ENST00000439765 SPSB2Q99619 263 aa16.77■□□□□ 0.28
CCDC188-201ENST00000439765 YIPF2Q9BWQ6 316 aa16.77■□□□□ 0.28
CCDC188-201ENST00000439765 WDR54Q9H977 334 aa16.77■□□□□ 0.28
CCDC188-201ENST00000439765 TRPC4Q9UBN4 977 aa16.77■□□□□ 0.28
CCDC188-201ENST00000439765 ZFP69BQ9UJL9 534 aa16.77■□□□□ 0.28
CCDC188-201ENST00000439765 ANAPC2Q9UJX6 822 aa16.77■□□□□ 0.28
CCDC188-201ENST00000439765 ZNF860A6NHJ4 632 aa16.76■□□□□ 0.27
CCDC188-201ENST00000439765 K7EPI3 171 aa16.76■□□□□ 0.27
CCDC188-201ENST00000439765 SIX3O95343 332 aaPredicted RBP16.76■□□□□ 0.27
CCDC188-201ENST00000439765 ONECUT2O95948 504 aa16.76■□□□□ 0.27
CCDC188-201ENST00000439765 ALBP02768 609 aa16.76■□□□□ 0.27
CCDC188-201ENST00000439765 UMODP07911 640 aa16.76■□□□□ 0.27
CCDC188-201ENST00000439765 CD22P20273 847 aa16.76■□□□□ 0.27
CCDC188-201ENST00000439765 AHRP35869 848 aa16.76■□□□□ 0.27
CCDC188-201ENST00000439765 PRKAA2P54646 552 aa16.76■□□□□ 0.27
CCDC188-201ENST00000439765 DNAJB13P59910 316 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms