RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 PRSS41Q7RTY9 318 aa11.2□□□□□ -0.62
HSPG2-206ENST00000439717 VN1R5Q7Z5H4 357 aa11.2□□□□□ -0.62
HSPG2-206ENST00000439717 TRABD2AQ86V40 505 aa11.2□□□□□ -0.62
HSPG2-206ENST00000439717 PDSS2Q86YH6 399 aa11.2□□□□□ -0.62
HSPG2-206ENST00000439717 APLFQ8IW19 511 aaPredicted RBP11.2□□□□□ -0.62
HSPG2-206ENST00000439717 L3MBTL4Q8NA19 623 aa11.2□□□□□ -0.62
HSPG2-206ENST00000439717 ZNF483Q8TF39 744 aaPredicted RBP11.2□□□□□ -0.62
HSPG2-206ENST00000439717 REPS1Q96D71 796 aa11.2□□□□□ -0.62
HSPG2-206ENST00000439717 CCDC126Q96EE4 140 aa11.2□□□□□ -0.62
HSPG2-206ENST00000439717 VPS50Q96JG6 964 aa11.2□□□□□ -0.62
HSPG2-206ENST00000439717 MAGEB10Q96LZ2 347 aaPredicted RBP11.2□□□□□ -0.62
HSPG2-206ENST00000439717 ARHGAP9Q9BRR9 750 aa11.2□□□□□ -0.62
HSPG2-206ENST00000439717 NTMT1Q9BV86 223 aa11.2□□□□□ -0.62
HSPG2-206ENST00000439717 YIPF2Q9BWQ6 316 aa11.2□□□□□ -0.62
HSPG2-206ENST00000439717 SOX17Q9H6I2 414 aaPredicted RBP11.2□□□□□ -0.62
HSPG2-206ENST00000439717 NOL11Q9H8H0 719 aaKnown RBP11.2□□□□□ -0.62
HSPG2-206ENST00000439717 SEMA3GQ9NS98 782 aa11.2□□□□□ -0.62
HSPG2-206ENST00000439717 MKS1Q9NXB0 559 aa11.2□□□□□ -0.62
HSPG2-206ENST00000439717 PCTPQ9UKL6 214 aa11.2□□□□□ -0.62
HSPG2-206ENST00000439717 MAN2B2Q9Y2E5 1009 aa11.2□□□□□ -0.62
HSPG2-206ENST00000439717 NAALAD2Q9Y3Q0 740 aa11.2□□□□□ -0.62
HSPG2-206ENST00000439717 PCDHGA11Q9Y5H2 935 aa11.2□□□□□ -0.62
HSPG2-206ENST00000439717 KCNMB2Q9Y691 235 aa11.2□□□□□ -0.62
HSPG2-206ENST00000439717 FER1L5A0AVI2 2057 aa11.2□□□□□ -0.62
HSPG2-206ENST00000439717 MGAQ8IWI9 3026 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 A0A088AWK7 358 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 CCDC151A5D8V7 595 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 FOXO6A8MYZ6 492 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 H0YIV9 168 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 SGK494L7N484 410 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 PEX12O00623 359 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 OR7A17O14581 309 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 DLX3O60479 287 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 CLDN9O95484 217 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 CYC1P08574 325 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 SFTPCP11686 197 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 IMPDH1P20839 514 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 ZNF10P21506 573 aaPredicted RBP11.19□□□□□ -0.62
HSPG2-206ENST00000439717 OTX2P32243 289 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 PIK3CBP42338 1070 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 CCNG1P51959 295 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 PRKAA2P54646 552 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 RRADP55042 308 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 NAA20P61599 178 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 HERVK_113P63132 956 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 SNRPNP63162 240 aaKnown RBP11.19□□□□□ -0.62
HSPG2-206ENST00000439717 KLC1Q07866 573 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 TGM3Q08188 693 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 ADPRMQ3LIE5 342 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 DEFB134Q4QY38 66 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 TMEM35AQ53FP2 167 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 VWA2Q5GFL6 755 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 C10orf62Q5T681 223 aaPredicted RBP11.19□□□□□ -0.62
HSPG2-206ENST00000439717 MED25Q71SY5 747 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 MRGPREQ86SM8 312 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 CROCCP2Q86T23 111 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 ZC3H7AQ8IWR0 971 aaKnown RBP11.19□□□□□ -0.62
HSPG2-206ENST00000439717 TMEM102Q8N9M5 508 aaPredicted RBP11.19□□□□□ -0.62
HSPG2-206ENST00000439717 OR7G3Q8NG95 312 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 OR51Q1Q8NH59 317 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 RDH11Q8TC12 318 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 ZNF473Q8WTR7 871 aaKnown RBP11.19□□□□□ -0.62
HSPG2-206ENST00000439717 CCT6BQ92526 530 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 ATP6V1E2Q96A05 226 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 GAL3ST3Q96A11 431 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 MS4A6EQ96DS6 147 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 CRB3Q9BUF7 120 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 ERVK-6Q9BXR3 956 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 REXO4Q9GZR2 422 aaKnown RBP11.19□□□□□ -0.62
HSPG2-206ENST00000439717 ADNPQ9H2P0 1102 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 KLHL31Q9H511 634 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 TUBD1Q9UJT1 453 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 EMCNQ9ULC0 261 aa11.19□□□□□ -0.62
HSPG2-206ENST00000439717 SEC16AO15027 2179 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 PLIN3O60664 434 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 RDH16O75452 317 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 BMP10O95393 424 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 TBX6O95947 436 aaPredicted RBP11.18□□□□□ -0.62
HSPG2-206ENST00000439717 OTCP00480 354 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 PROCP04070 461 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 MYL2P10916 166 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 PCNAP12004 261 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 HNRNPH1P31943 449 aaKnown RBP11.18□□□□□ -0.62
HSPG2-206ENST00000439717 POLE2P56282 527 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 RAB8AP61006 207 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 PHEXP78562 749 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 MAT1AQ00266 395 aaKnown RBP11.18□□□□□ -0.62
HSPG2-206ENST00000439717 ZNF844Q08AG5 666 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 SYT16Q17RD7 645 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 GGTA1PQ4G0N0 100 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 ZNF678Q5SXM1 525 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 TRIM40Q6P9F5 258 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 PCSK4Q6UW60 755 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 ZYG11AQ6WRX3 759 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 SHISA6Q6ZSJ9 500 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 PPP1R32Q7Z5V6 425 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 MYLK4Q86YV6 388 aaPredicted RBP11.18□□□□□ -0.62
HSPG2-206ENST00000439717 IQCKQ8N0W5 287 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 C4orf33Q8N1A6 199 aa11.18□□□□□ -0.62
HSPG2-206ENST00000439717 SRFBP1Q8NEF9 429 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms