RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 NSL1Q96IY1 281 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 NUDCD1Q96RS6 583 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 GPATCH1Q9BRR8 931 aaKnown RBP2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 RPP25Q9BUL9 199 aaKnown RBP2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 LRRC61Q9BV99 259 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 AGXT2Q9BYV1 514 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 POLR1BQ9H9Y6 1135 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 ACKR4Q9NPB9 350 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 ERAP1Q9NZ08 941 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 SLC13A4Q9UKG4 626 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 MROH5Q6ZUA9 1318 aa2.4□□□□□ -2.03
HMGB1P18-201ENST00000438801 SIPA1L3O60292 1781 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 ANHXE9PGG2 379 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 RNF103O00237 685 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 KLF11O14901 512 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 CTAGE5O15320 804 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 PTGER3P43115 390 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 MAPK9P45984 424 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 LEPRP48357 1165 aaKnown RBP2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 GPR143P51810 404 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 GALCP54803 685 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 MS4A2Q01362 244 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 DMTNQ08495 405 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 DRP2Q13474 957 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 BIRC3Q13489 604 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 PARP10Q53GL7 1025 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 ACAD10Q6JQN1 1059 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 C12orf54Q6X4T0 127 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 KIF6Q6ZMV9 814 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 Q6ZS52 159 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 GPRIN3Q6ZVF9 776 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 PIGZQ86VD9 579 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 Q8N377 158 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 ESX1Q8N693 406 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 KBTBD8Q8NFY9 601 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 OR2L2Q8NH16 312 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 OLIG1Q8TAK6 271 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 ZFAND2BQ8WV99 257 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 DAZLQ92904 295 aaKnown RBP2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 PERPQ96FX8 193 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 WDFY2Q96P53 400 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 CCNL2Q96S94 520 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 GAD1Q99259 594 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 FUCA2Q9BTY2 467 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 TRAF4Q9BUZ4 470 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 SLA2Q9H6Q3 261 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 LRTM1Q9HBL6 345 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 WASH6PQ9NQA3 447 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 SPHK2Q9NRA0 654 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 TAB2Q9NYJ8 693 aa2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 LAS1LQ9Y4W2 734 aaKnown RBP2.39□□□□□ -2.03
HMGB1P18-201ENST00000438801 SRRM2Q9UQ35 2752 aaKnown RBP2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 FLG2Q5D862 2391 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 MEX3AA1L020 520 aaKnown RBP2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 MEI4A8MW99 385 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 ERVV-1B6SEH8 477 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 OGG1O15527 345 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 NXPH2O95156 264 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 STBD1O95210 358 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 PIGNO95427 931 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 PYGLP06737 847 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 ZSCAN5DPP0CG00 497 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 RBMY1CP0DJD4 496 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 LAMP2P13473 410 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 EFNA1P20827 205 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 TLE4Q04727 773 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 NIPAL4Q0D2K0 466 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 TCP10Q12799 353 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 COX10Q12887 443 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 KLRB1Q12918 225 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 ELAVL2Q12926 359 aaKnown RBP2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 TAF13Q15543 124 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 CEBPEQ15744 281 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 HLA-BQ31612 363 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 GCNT6Q5T4J0 391 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 GORABQ5T7V8 394 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 HES3Q5TGS1 186 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 ADALQ6DHV7 355 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 GLDNQ6ZMI3 551 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 GET4Q7L5D6 327 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 GALNT5Q7Z7M9 940 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 ARHGAP12Q8IWW6 846 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 HJURPQ8NCD3 748 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 OR4C3Q8NH37 302 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 C9orf43Q8TAL5 461 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 FAM3CQ92520 227 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 DYRK2Q92630 601 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 GTF3AQ92664 365 aaKnown RBP2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 FGF14Q92915 247 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 ZUFSPQ96AP4 578 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 SGK494Q96LW2 274 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 NSMCE3Q96MG7 304 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 ZNF582Q96NG8 517 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 KRT12Q99456 494 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 SOSTQ9BQB4 213 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 RAB11FIP5Q9BXF6 653 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 TRIM6Q9C030 488 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 EPHA6Q9UF33 1036 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 WDR37Q9Y2I8 494 aa2.38□□□□□ -2.03
HMGB1P18-201ENST00000438801 HELZP42694 1942 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms