RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 NINLQ9Y2I6 1382 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 IQANK1A0A1B0GTG1 560 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 FEZF1A0PJY2 475 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 C1orf226A1L170 272 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 TMEM89A2RUT3 159 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 CBY3A6NI87 242 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 DUXAA6NLW8 204 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 ANKRD30BLA7E2S9 258 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 AP5Z1O43299 807 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 GRID2O43424 1007 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 CALUO43852 315 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 ATP6V1G1O75348 118 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 RAD51DO75771 328 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 CDC123O75794 336 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 OR4F21O95013 312 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 PIGNO95427 931 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 GPANK1O95872 356 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 NDUFB10O96000 172 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 MBP02144 154 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 HIST1H2ABP04908 130 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 IGKV2-30P06310 120 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 VPREB1P12018 145 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 ZNF18P17022 549 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 HIST1H2ADP20671 130 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 PCMT1P22061 227 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 ITGA3P26006 1051 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 MAT2AP31153 395 aaKnown RBP3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 NAMPTP43490 491 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 IER3P46695 156 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 ACADVLP49748 655 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 RGS7P49802 495 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 VAV2P52735 878 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 DGKQP52824 942 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 STX17P56962 302 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 POLR2GP62487 172 aaKnown RBP eCLIP3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 POLR2LP62875 67 aaKnown RBP3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 SKP1P63208 163 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 ENPEPQ07075 957 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 E2F2Q14209 437 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 SELPLGQ14242 412 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 NONOQ15233 471 aaKnown RBP eCLIP3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 RPE65Q16518 533 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 EXOC3L2Q2M3D2 409 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 FAM174BQ3ZCQ3 159 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 THEM4Q5T1C6 240 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 TSTD2Q5T7W7 516 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 NDUFAF5Q5TEU4 345 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 PLCXD3Q63HM9 321 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 SEL1L3Q68CR1 1132 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 HIST2H2BCQ6DN03 193 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 HIST2H2BDQ6DRA6 164 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 ASPHD2Q6ICH7 369 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 RGS7BPQ6MZT1 257 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 SCYL2Q6P3W7 929 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 ENPP7Q6UWV6 458 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 TMEM108Q6UXF1 575 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 IL20RBQ6UXL0 311 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 SYT10Q6XYQ8 523 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 QSOX2Q6ZRP7 698 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 ANO5Q75V66 913 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 EIF3MQ7L2H7 374 aaKnown RBP3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 HIST3H2AQ7L7L0 130 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 PTF1AQ7RTS3 328 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 NEK8Q86SG6 692 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 PAQR7Q86WK9 346 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 VRK2Q86Y07 508 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 TMEM126BQ8IUX1 230 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 FAM114A1Q8IWE2 563 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 FOXRED2Q8IWF2 684 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 NELFCDQ8IXH7 590 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 CFAP52Q8N1V2 620 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 DNAAF1Q8NEP3 725 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 OR5D13Q8NGL4 314 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 UBA3Q8TBC4 463 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 LRRC20Q8TCA0 184 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 GPX8Q8TED1 209 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 GDPD5Q8WTR4 605 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 TANKQ92844 425 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 MOAP1Q96BY2 351 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 FAM122AQ96E09 287 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 MS4A10Q96PG2 267 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 ZNF317Q96PQ6 595 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 BBS4Q96RK4 519 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 RAB40CQ96S21 281 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 MYADMQ96S97 322 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 FEVQ99581 238 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 SLC29A1Q99808 456 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 ATG101Q9BSB4 218 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 PTDSS2Q9BVG9 487 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 VN1R3Q9BXE9 311 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 NUF2Q9BZD4 464 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 ROPN1BQ9BZX4 212 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 API5Q9BZZ5 524 aaKnown RBP3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 HDHD2Q9H0R4 259 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 MEAF6Q9HAF1 191 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 MAN2C1Q9NTJ4 1040 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 TUBA8Q9NY65 449 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 SMARCAL1Q9NZC9 954 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 FAM30AQ9NZY2 134 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 NLKQ9UBE8 527 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms