RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 ABATP80404 500 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 MRPL49Q13405 166 aaKnown RBP15.34■□□□□ 0.05
PTPN13-204ENST00000436978 SLC36A4Q6YBV0 504 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 WDR92Q96MX6 357 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 SUSD2Q9UGT4 822 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 LAMP5Q9UJQ1 280 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 INO80EQ8NBZ0 244 aaPredicted RBP15.34■□□□□ 0.05
PTPN13-204ENST00000436978 SLC2A13Q96QE2 648 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 EBF4Q9BQW3 602 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 DOCK2Q92608 1830 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 MATN2O00339 956 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 HLA-EP13747 358 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 AOC1P19801 751 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 FBLP22087 321 aaKnown RBP15.34■□□□□ 0.05
PTPN13-204ENST00000436978 SLC18A2Q05940 514 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 ARHGAP9Q9BRR9 750 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 EHD1Q9H4M9 534 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 WDR6Q9NNW5 1121 aaKnown RBP15.34■□□□□ 0.05
PTPN13-204ENST00000436978 TMEM184CQ9NVA4 438 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 CYP8B1Q9UNU6 501 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 LOC100130705A0A1B0GUX0 176 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 ADAMTS3O15072 1205 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 DLX3O60479 287 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 CFHP08603 1231 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 MTHFD1P11586 935 aaKnown RBP15.34■□□□□ 0.05
PTPN13-204ENST00000436978 GADD45AP24522 165 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 DSC3Q14574 896 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 FAM86B1Q8N7N1 296 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 FAM156AQ8NDB6 213 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 PKP4Q99569 1192 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 REEP4Q9H6H4 257 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 SPATA6Q9NWH7 488 aaPredicted RBP15.34■□□□□ 0.05
PTPN13-204ENST00000436978 ASB6Q9NWX5 421 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 SIX4Q9UIU6 781 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 SLC6A4P31645 630 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 CHAF1BQ13112 559 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 ZNF678Q5SXM1 525 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 ZNF296Q8WUU4 475 aaPredicted RBP15.34■□□□□ 0.05
PTPN13-204ENST00000436978 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.34■□□□□ 0.05
PTPN13-204ENST00000436978 KCNK6Q9Y257 313 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 RNF11Q9Y3C5 154 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 TULP2O00295 520 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 CDKN1CP49918 316 aaPredicted RBP15.34■□□□□ 0.05
PTPN13-204ENST00000436978 SELENOVP59797 346 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 ABHD18Q0P651 414 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 PYHIN1Q6K0P9 492 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 CDCA3Q99618 268 aaPredicted RBP15.34■□□□□ 0.05
PTPN13-204ENST00000436978 TM9SF3Q9HD45 589 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 GPR34Q9UPC5 381 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 BACE2Q9Y5Z0 518 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 BCAS2O75934 225 aaPredicted RBP15.34■□□□□ 0.05
PTPN13-204ENST00000436978 SNAPC5O75971 98 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 CBLBQ13191 982 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 TRAM1Q15629 374 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 PTCHD3Q3KNS1 767 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 GPAT4Q86UL3 456 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 GID4Q8IVV7 300 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 RHEBL1Q8TAI7 183 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 GLYATL1Q969I3 302 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 IMP4Q96G21 291 aaKnown RBP15.34■□□□□ 0.05
PTPN13-204ENST00000436978 GABRQQ9UN88 632 aa15.34■□□□□ 0.05
PTPN13-204ENST00000436978 SYPP08247 313 aa15.33■□□□□ 0.05
PTPN13-204ENST00000436978 PEPDP12955 493 aa15.33■□□□□ 0.05
PTPN13-204ENST00000436978 KHDC1Q4VXA5 237 aaKnown RBP15.33■□□□□ 0.05
PTPN13-204ENST00000436978 PGBD2Q6P3X8 592 aa15.33■□□□□ 0.05
PTPN13-204ENST00000436978 RNF130Q86XS8 419 aa15.33■□□□□ 0.05
PTPN13-204ENST00000436978 SEC61A2Q9H9S3 476 aa15.33■□□□□ 0.05
PTPN13-204ENST00000436978 BRD7Q9NPI1 651 aa15.33■□□□□ 0.05
PTPN13-204ENST00000436978 PRSS51A0A1B0GVH4 220 aa15.33■□□□□ 0.05
PTPN13-204ENST00000436978 SH3PXD2BA1X283 911 aa15.33■□□□□ 0.05
PTPN13-204ENST00000436978 AHSA1O95433 338 aa15.33■□□□□ 0.05
PTPN13-204ENST00000436978 ZNF12P17014 697 aa15.33■□□□□ 0.05
PTPN13-204ENST00000436978 DCKP27707 260 aa15.33■□□□□ 0.05
PTPN13-204ENST00000436978 HNF1BP35680 557 aa15.33■□□□□ 0.05
PTPN13-204ENST00000436978 KCNJ5P48544 419 aa15.33■□□□□ 0.05
PTPN13-204ENST00000436978 LMAN2Q12907 356 aa15.33■□□□□ 0.05
PTPN13-204ENST00000436978 FLYWCH1Q4VC44 716 aa15.33■□□□□ 0.05
PTPN13-204ENST00000436978 BBS10Q8TAM1 723 aa15.33■□□□□ 0.05
PTPN13-204ENST00000436978 C17orf62Q9BQA9 187 aa15.33■□□□□ 0.05
PTPN13-204ENST00000436978 ADAM15Q13444 863 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 EIF4HQ15056 248 aaKnown RBP15.33■□□□□ 0.04
PTPN13-204ENST00000436978 FAM170BA6NMN3 283 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 PREPP48147 710 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 POU6F2P78424 691 aaPredicted RBP15.33■□□□□ 0.04
PTPN13-204ENST00000436978 ASPGQ86U10 573 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 OR5M3Q8NGP4 307 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 ARMC5Q96C12 935 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 PEBP4Q96S96 227 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 MED11Q9P086 117 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 OCLNQ16625 522 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 HRASLS2Q9NWW9 162 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 CYTH4Q9UIA0 394 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 TMEM59LQ9UK28 342 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 EI24O14681 340 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 RNF13O43567 381 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 CREG1O75629 220 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 HK1P19367 917 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 ITIH1P19827 911 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 SEPHS1P49903 392 aa15.33■□□□□ 0.04
PTPN13-204ENST00000436978 PCLAFQ15004 111 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms