RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 ASB11Q8WXH4 323 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 TM4SF19Q96DZ7 209 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 CALR3Q96L12 384 aaKnown RBP13.85□□□□□ -0.19
HDAC8-213ENST00000436675 PTCHD1Q96NR3 888 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 TRIM45Q9H8W5 580 aaPredicted RBP13.85□□□□□ -0.19
HDAC8-213ENST00000436675 CCDC177Q9NQR7 707 aaPredicted RBP13.85□□□□□ -0.19
HDAC8-213ENST00000436675 BFARQ9NZS9 450 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 ST6GALNAC2Q9UJ37 374 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 PLEKHA6Q9Y2H5 1048 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 FAM237BA0A1B0GVD1 139 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 TMEM200CA6NKL6 621 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 FAM166BA8MTA8 275 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 FCHO1O14526 889 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 PFDN6O15212 129 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 SLC16A5O15375 505 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 FAM155BO75949 473 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 SERPIND1P05546 499 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 TRHRP34981 398 aaPredicted RBP13.84□□□□□ -0.19
HDAC8-213ENST00000436675 RPL22P35268 128 aaKnown RBP13.84□□□□□ -0.19
HDAC8-213ENST00000436675 NPY2RP49146 381 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 CLCN7P51798 805 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 TERF1P54274 439 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 DLX5P56178 289 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 MPP1Q00013 466 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 MEF2AQ02078 507 aaPredicted RBP13.84□□□□□ -0.19
HDAC8-213ENST00000436675 CAPN13Q6MZZ7 669 aaPredicted RBP13.84□□□□□ -0.19
HDAC8-213ENST00000436675 MBOAT1Q6ZNC8 495 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 UBE2R2Q712K3 238 aaPredicted RBP13.84□□□□□ -0.19
HDAC8-213ENST00000436675 CYP4Z2PQ8N1L4 340 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 TMEM156Q8N614 296 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 C16orf52Q8NHV5 167 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 SREK1Q8WXA9 508 aaKnown RBP13.84□□□□□ -0.19
HDAC8-213ENST00000436675 TBC1D20Q96BZ9 403 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 THAP11Q96EK4 314 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 OR1F2PQ96R84 312 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 GPATCH1Q9BRR8 931 aaKnown RBP13.84□□□□□ -0.19
HDAC8-213ENST00000436675 IL22Q9GZX6 179 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 PNPLA3Q9NST1 481 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 ZNF358Q9NW07 568 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 PAK5Q9P286 719 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 MPDZO75970 2070 aa13.84□□□□□ -0.19
HDAC8-213ENST00000436675 TRBV11-1A0A0K0K1C0 115 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 SAGE2PA6NJ88 616 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 BTNL10A8MVZ5 291 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 MIF4GDA9UHW6 222 aaKnown RBP13.83□□□□□ -0.2
HDAC8-213ENST00000436675 ZBTB14O43829 449 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 IPO7O95373 1038 aaKnown RBP13.83□□□□□ -0.2
HDAC8-213ENST00000436675 SLC35G6P0C7Q6 338 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 CDH1P12830 882 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 MAOAP21397 527 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 IL10P22301 178 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 HRH2P25021 359 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 BASP1P80723 227 aaKnown RBP13.83□□□□□ -0.2
HDAC8-213ENST00000436675 PLGLB1Q02325 96 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 TTLL9Q3SXZ7 439 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 GXYLT1Q4G148 440 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 DEFB134Q4QY38 66 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 ZNF585AQ6P3V2 769 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 ACAD11Q709F0 780 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 CENPUQ71F23 418 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 PIWIL4Q7Z3Z4 852 aaKnown RBP13.83□□□□□ -0.2
HDAC8-213ENST00000436675 C17orf64Q86WR6 236 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 ZFP62Q8NB50 900 aaPredicted RBP13.83□□□□□ -0.2
HDAC8-213ENST00000436675 FBXO15Q8NCQ5 510 aaPredicted RBP13.83□□□□□ -0.2
HDAC8-213ENST00000436675 ZNF740Q8NDX6 193 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 NINJ1Q92982 152 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 PANX2Q96RD6 677 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 TCF12Q99081 682 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 ATG10Q9H0Y0 220 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 RHBGQ9H310 441 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 KCMF1Q9P0J7 381 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 FBXW2Q9UKT8 454 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 L3MBTL1Q9Y468 752 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 SLC22A7Q9Y694 548 aa13.83□□□□□ -0.2
HDAC8-213ENST00000436675 CTAGE9A4FU28 777 aa13.82□□□□□ -0.2
HDAC8-213ENST00000436675 PINLYPA6NC86 204 aa13.82□□□□□ -0.2
HDAC8-213ENST00000436675 GFYI3L273 518 aa13.82□□□□□ -0.2
HDAC8-213ENST00000436675 NDUFS4O43181 175 aa13.82□□□□□ -0.2
HDAC8-213ENST00000436675 PROM1O43490 865 aa13.82□□□□□ -0.2
HDAC8-213ENST00000436675 GALR3O60755 368 aaPredicted RBP13.82□□□□□ -0.2
HDAC8-213ENST00000436675 CTAG2O75638 210 aa13.82□□□□□ -0.2
HDAC8-213ENST00000436675 MPC1LP0DKB6 136 aa13.82□□□□□ -0.2
HDAC8-213ENST00000436675 JAK1P23458 1154 aa13.82□□□□□ -0.2
HDAC8-213ENST00000436675 DNASE1P24855 282 aa13.82□□□□□ -0.2
HDAC8-213ENST00000436675 SKIV2L2P42285 1042 aaKnown RBP13.82□□□□□ -0.2
HDAC8-213ENST00000436675 PPIAP62937 165 aaKnown RBP13.82□□□□□ -0.2
HDAC8-213ENST00000436675 HERC3Q15034 1050 aa13.82□□□□□ -0.2
HDAC8-213ENST00000436675 RPS6KA1Q15418 735 aa13.82□□□□□ -0.2
HDAC8-213ENST00000436675 CYHR1Q6ZMK1 362 aa13.82□□□□□ -0.2
HDAC8-213ENST00000436675 C16orf47Q6ZP98 133 aaPredicted RBP13.82□□□□□ -0.2
HDAC8-213ENST00000436675 KIAA1328Q86T90 577 aa13.82□□□□□ -0.2
HDAC8-213ENST00000436675 LIX1LQ8IVB5 337 aa13.82□□□□□ -0.2
HDAC8-213ENST00000436675 CPNE9Q8IYJ1 553 aa13.82□□□□□ -0.2
HDAC8-213ENST00000436675 MFSD9Q8NBP5 474 aa13.82□□□□□ -0.2
HDAC8-213ENST00000436675 NFAM1Q8NET5 270 aaPredicted RBP13.82□□□□□ -0.2
HDAC8-213ENST00000436675 SMR3AQ99954 134 aa13.82□□□□□ -0.2
HDAC8-213ENST00000436675 KIFC1Q9BW19 673 aa13.82□□□□□ -0.2
HDAC8-213ENST00000436675 SLC6A16Q9GZN6 736 aa13.82□□□□□ -0.2
HDAC8-213ENST00000436675 LIN28AQ9H9Z2 209 aaKnown RBP13.82□□□□□ -0.2
HDAC8-213ENST00000436675 NECTIN3Q9NQS3 549 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms