RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 CIDECQ96AQ7 238 aaPredicted RBP11.35□□□□□ -0.59
CD44-209ENST00000433892 TIFAQ96CG3 184 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 ZHX1-C8orf76Q96EF9 292 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 METTL2AQ96IZ6 378 aaKnown RBP11.35□□□□□ -0.59
CD44-209ENST00000433892 CCM2Q9BSQ5 444 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 RC3H2Q9HBD1 1191 aaKnown RBP11.35□□□□□ -0.59
CD44-209ENST00000433892 ZBTB20Q9HC78 741 aaPredicted RBP11.35□□□□□ -0.59
CD44-209ENST00000433892 ASAH2Q9NR71 780 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 ZNF282Q9UDV7 671 aaPredicted RBP11.35□□□□□ -0.59
CD44-209ENST00000433892 ACSL6Q9UKU0 697 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 MAFFQ9ULX9 164 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 SH2B3Q9UQQ2 575 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 KCNE2Q9Y6J6 123 aa11.35□□□□□ -0.59
CD44-209ENST00000433892 RNASET2O00584 256 aaKnown RBP11.34□□□□□ -0.59
CD44-209ENST00000433892 MRPS14O60783 128 aaKnown RBP11.34□□□□□ -0.59
CD44-209ENST00000433892 RFPL2O75678 378 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 C6orf47O95873 294 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 ZNF8P17098 575 aaPredicted RBP11.34□□□□□ -0.59
CD44-209ENST00000433892 XPAP23025 273 aaPredicted RBP11.34□□□□□ -0.59
CD44-209ENST00000433892 GRK3P35626 688 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 SLC19A1P41440 591 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 IDH2P48735 452 aaKnown RBP11.34□□□□□ -0.59
CD44-209ENST00000433892 NUDT6P53370 316 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 CDH12P55289 794 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 TEAD4Q15561 434 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 IER5LQ5T953 404 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 UBE2UQ5VVX9 321 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 MED27Q6P2C8 311 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 CCDC103Q8IW40 242 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 SYTL1Q8IYJ3 562 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 ZNF366Q8N895 744 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 OR10G2Q8NGC3 310 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 PHF10Q8WUB8 498 aaKnown RBP11.34□□□□□ -0.59
CD44-209ENST00000433892 ZNF480Q8WV37 535 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 IRF7Q92985 503 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 SLC35A5Q9BS91 424 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 TMEM121BQ9BXQ6 578 aaPredicted RBP11.34□□□□□ -0.59
CD44-209ENST00000433892 ITPAQ9BY32 194 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 ITM2BQ9Y287 266 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 CLDN24A6NM45 220 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 ADAMDEC1O15204 470 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 TGFB1P01137 390 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 GGT2P36268 569 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 PRLHRP49683 370 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 CLK1P49759 484 aaKnown RBP11.34□□□□□ -0.59
CD44-209ENST00000433892 TBPL1P62380 186 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 SPIBQ01892 262 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 GRIN2CQ14957 1233 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 MAPK11Q15759 364 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 LY6G5CQ5SRR4 150 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 ARMCX6Q7L4S7 300 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 ANKRD33Q7Z3H0 272 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 COMMD6Q7Z4G1 85 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 KLHL23Q8NBE8 558 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 KREMEN2Q8NCW0 462 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 OR5AK3PQ8NH89 298 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 NFKBIDQ8NI38 313 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 SLC38A4Q969I6 547 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 AP2M1Q96CW1 435 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 ERLEC1Q96DZ1 483 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 FOPNLQ96NB1 174 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 NIPSNAP1Q9BPW8 284 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 TCF25Q9BQ70 676 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 REEP4Q9H6H4 257 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 POLE4Q9NR33 117 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 GULP1Q9UBP9 304 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 PSORS1C1Q9UIG5 152 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 OSGIN1Q9UJX0 560 aa11.34□□□□□ -0.59
CD44-209ENST00000433892 PRAMEF25A6NGN4 478 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 H3BM21 787 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 J3KTA2 159 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 M0R082 166 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 M0R129 80 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 QSOX1O00391 747 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 AIREO43918 545 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 TNFRSF21O75509 655 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 FGF18O76093 207 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 NPPBP16860 134 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 POLR2EP19388 210 aaKnown RBP11.33□□□□□ -0.6
CD44-209ENST00000433892 TPP2P29144 1249 aaPredicted RBP11.33□□□□□ -0.6
CD44-209ENST00000433892 RXRGP48443 463 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 PRIM2P49643 509 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 CSNK2BP67870 215 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 MEF2AQ02078 507 aaPredicted RBP11.33□□□□□ -0.6
CD44-209ENST00000433892 ZNF763Q0D2J5 394 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 ELP6Q0PNE2 266 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 FADDQ13158 208 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 SCARB2Q14108 478 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 SLBPQ14493 270 aaKnown RBP eCLIP11.33□□□□□ -0.6
CD44-209ENST00000433892 LILRA6Q6PI73 481 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 SLC39A5Q6ZMH5 540 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 TECPR1Q7Z6L1 1165 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 GGHQ92820 318 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 FAM83CQ9BQN1 747 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 WRAP53Q9BUR4 548 aaKnown RBP11.33□□□□□ -0.6
CD44-209ENST00000433892 BHLHE41Q9C0J9 482 aaPredicted RBP11.33□□□□□ -0.6
CD44-209ENST00000433892 ZBP1Q9H171 429 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 DCSTAMPQ9H295 470 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 OR51B5Q9H339 312 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 SPHK2Q9NRA0 654 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms