RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 TIA1P31483 386 aaKnown RBP eCLIP17.4■□□□□ 0.382e-6■■□□□ 12.1
HMGN1-206ENST00000431390 CPA2P48052 419 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 ARFIP1P53367 373 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 RAE1P78406 368 aaKnown RBP17.4■□□□□ 0.38
HMGN1-206ENST00000431390 PTGR1Q14914 329 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 ADPRMQ3LIE5 342 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 TMEM35AQ53FP2 167 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 BLOC1S3Q6QNY0 202 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 RNF44Q7L0R7 432 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 ASRGL1Q7L266 308 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 GLB1L3Q8NCI6 653 aaPredicted RBP17.4■□□□□ 0.38
HMGN1-206ENST00000431390 ZFYVE21Q9BQ24 234 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 C1orf21Q9H246 121 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 WDFY3Q8IZQ1 3526 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 AKAP13Q12802 2813 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 DYTNA2CJ06 578 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 BBIP1A8MTZ0 92 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 B2RBV5 119 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 NDUFS4O43181 175 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 SIGLEC6O43699 453 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 DUX1O43812 170 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 PVRP15151 417 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 CD1EP15812 388 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 ALDH4A1P30038 563 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 ZFP36L2P47974 494 aaKnown RBP17.4■□□□□ 0.38
HMGN1-206ENST00000431390 POLR2JP52435 117 aaKnown RBP17.4■□□□□ 0.38
HMGN1-206ENST00000431390 CLDN8P56748 225 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 CYP4F3Q08477 520 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 RCAN2Q14206 197 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 IRGCQ6NXR0 463 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 COMMD6Q7Z4G1 85 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 CARFQ8N187 725 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 ZCCHC14Q8WYQ9 949 aaKnown RBP17.4■□□□□ 0.38
HMGN1-206ENST00000431390 KLHL29Q96CT2 875 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 ZDHHC12Q96GR4 267 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 AHCYL2Q96HN2 611 aaKnown RBP17.4■□□□□ 0.38
HMGN1-206ENST00000431390 TEX37Q96LM6 180 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 PPM1MQ96MI6 270 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 TRAPPC9Q96Q05 1148 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 OR2A5Q96R48 311 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 ZBTB18Q99592 522 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 GTPBP2Q9BX10 602 aaKnown RBP17.4■□□□□ 0.38
HMGN1-206ENST00000431390 DPY30Q9C005 99 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.4■□□□□ 0.38
HMGN1-206ENST00000431390 MCM8Q9UJA3 840 aa17.4■□□□□ 0.38
HMGN1-206ENST00000431390 LRIT2A6NDA9 550 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 TLCD2A6NGC4 264 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 PLPP1O14494 284 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 CAPN5O15484 640 aaPredicted RBP17.39■□□□□ 0.37
HMGN1-206ENST00000431390 HYAL3O43820 417 aaPredicted RBP17.39■□□□□ 0.37
HMGN1-206ENST00000431390 PCDH7O60245 1069 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 PRMT3O60678 531 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 CTSVO60911 334 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 DNAJC8O75937 253 aaPredicted RBP17.39■□□□□ 0.37
HMGN1-206ENST00000431390 ASMTP46597 345 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 RAP1GDS1P52306 607 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 CLNS1AP54105 237 aaKnown RBP17.39■□□□□ 0.37
HMGN1-206ENST00000431390 KCNK10P57789 538 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 OR1D5P58170 312 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 PWP1Q13610 501 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 PAGE2Q7Z2X7 111 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 VN1R4Q7Z5H5 301 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 ASPGQ86U10 573 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 MINDY1Q8N5J2 469 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 C19orf47Q8N9M1 422 aaKnown RBP17.39■□□□□ 0.37
HMGN1-206ENST00000431390 OR2I1PQ8NGU4 316 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 NT5CQ8TCD5 201 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 RGMAQ96B86 450 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 F2RL3Q96RI0 385 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 BTBD10Q9BSF8 475 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 EBPLQ9BY08 206 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 REXO4Q9GZR2 422 aaKnown RBP17.39■□□□□ 0.37
HMGN1-206ENST00000431390 TAS2R1Q9NYW7 299 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 BAIAP2L1Q9UHR4 511 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 ADAM29Q9UKF5 820 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 MAPRE3Q9UPY8 281 aa17.39■□□□□ 0.37
HMGN1-206ENST00000431390 LY6G6EA0A0G2JKS1 128 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 SAP18O00422 153 aaKnown RBP17.38■□□□□ 0.37
HMGN1-206ENST00000431390 NR5A2O00482 541 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 SERPIND1P05546 499 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 ANXA4P09525 319 aaPredicted RBP17.38■□□□□ 0.37
HMGN1-206ENST00000431390 ST6GAL1P15907 406 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 TACR1P25103 407 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 IL12AP29459 219 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 HNRNPH1P31943 449 aaKnown RBP17.38■□□□□ 0.37
HMGN1-206ENST00000431390 PPM1FP49593 454 aaPredicted RBP17.38■□□□□ 0.37
HMGN1-206ENST00000431390 ATXN3P54252 364 aaPredicted RBP17.38■□□□□ 0.37
HMGN1-206ENST00000431390 C21orf58P58505 322 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 STXBP1P61764 594 aaKnown RBP17.38■□□□□ 0.37
HMGN1-206ENST00000431390 ACTN3Q08043 901 aaPredicted RBP17.38■□□□□ 0.37
HMGN1-206ENST00000431390 RGS1Q08116 209 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 HYAL2Q12891 473 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 COQ5Q5HYK3 327 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 RINLQ6ZS11 566 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 EID2Q8N6I1 236 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 SRFBP1Q8NEF9 429 aaKnown RBP17.38■□□□□ 0.37
HMGN1-206ENST00000431390 SLC13A3Q8WWT9 602 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 STARD8Q92502 1023 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 NCSTNQ92542 709 aa17.38■□□□□ 0.37
HMGN1-206ENST00000431390 CCDC74AQ96AQ1 378 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms