RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 ERI1Q8IV48 349 aaKnown RBP11.14□□□□□ -0.63
PTCH1-208ENST00000430669 MINDY2Q8NBR6 621 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 NKX1-2Q9UD57 310 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-208ENST00000430669 SCAMP2O15127 329 aaKnown RBP11.14□□□□□ -0.63
PTCH1-208ENST00000430669 PGRMC2O15173 223 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 ZNF217O75362 1048 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 RPL10P27635 214 aaKnown RBP11.14□□□□□ -0.63
PTCH1-208ENST00000430669 TUBA1BP68363 451 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 ZBED5Q49AG3 693 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 TRNP1Q6NT89 227 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 TUBA1AQ71U36 451 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 OR9I1Q8NGQ6 314 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 RHBDF1Q96CC6 855 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 G6PC3Q9BUM1 346 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 NTMT1Q9BV86 223 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 POLR2J3Q9H1A7 115 aaKnown RBP11.14□□□□□ -0.63
PTCH1-208ENST00000430669 IL26Q9NPH9 171 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 MARK1Q9P0L2 795 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 ENPP2Q13822 863 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 TOR1AIP1Q5JTV8 583 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 CRTC1Q6UUV9 634 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 OR13J1Q8NGT2 312 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 GTPBP3Q969Y2 492 aaKnown RBP11.14□□□□□ -0.63
PTCH1-208ENST00000430669 TMEM98Q9Y2Y6 226 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 IRAK3Q9Y616 596 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 SCN3AQ9NY46 2000 aa11.14□□□□□ -0.63
PTCH1-208ENST00000430669 ARHGEF33A8MVX0 844 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 HAT1O14929 419 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 SNAP47Q5SQN1 464 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 BICRALQ6AI39 1079 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 PAMR1Q6UXH9 720 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 EZH1Q92800 747 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-208ENST00000430669 FCRL4Q96PJ5 515 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 MND1Q9BWT6 205 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 CXorf21Q9HAI6 301 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 TAS2R9Q9NYW1 312 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 LHX3Q9UBR4 397 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 ZNF99A8MXY4 864 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-208ENST00000430669 FHP07954 510 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 GCAP28676 217 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 AP3S2P59780 193 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 AAK1Q2M2I8 961 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 PYDC2Q56P42 97 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 COLEC12Q5KU26 742 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 ZCCHC12Q6PEW1 402 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 NFKBIDQ8NI38 313 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 KLHDC7BQ96G42 594 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 ZNF778Q96MU6 729 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 SDR39U1Q9NRG7 319 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-208ENST00000430669 IL17CQ9P0M4 197 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 MAP10Q9P2G4 905 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 CXorf51AA0A1B0GTR3 108 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 FAM149AA5PLN7 773 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 MINDY4Q4G0A6 757 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 FAM46DQ8NEK8 389 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 OR4K14Q8NGD5 310 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 BBS10Q8TAM1 723 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 TRIM63Q969Q1 353 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 DOHHQ9BU89 302 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 RASSF1Q9NS23 344 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 KIAA0319Q5VV43 1072 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 NRROSQ86YC3 692 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-208ENST00000430669 WDR48Q8TAF3 677 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 SORT1Q99523 831 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 MKKSQ9NPJ1 570 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-208ENST00000430669 TSC22D4Q9Y3Q8 395 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 PEX16Q9Y5Y5 336 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 COL4A5P29400 1685 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 BCHEP06276 602 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 RCAN2Q14206 197 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 HNRNPA1L2Q32P51 320 aaKnown RBP11.13□□□□□ -0.63
PTCH1-208ENST00000430669 OGFOD2Q6N063 350 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 NCSTNQ92542 709 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 HSH2DQ96JZ2 352 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 GORASP1Q9BQQ3 440 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 C11orf16Q9NQ32 467 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 DLGAP4Q9Y2H0 992 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 HSPE1-MOB4S4R3N1 261 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 RNGTTO60942 597 aaKnown RBP11.13□□□□□ -0.63
PTCH1-208ENST00000430669 ACVR2AP27037 513 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 ZNF765Q7L2R6 523 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 ZNF366Q8N895 744 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 ANKFN1Q8N957 763 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 GSTO2Q9H4Y5 243 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 C19orf25Q9UFG5 118 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-208ENST00000430669 CDH7Q9ULB5 785 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 COQ6Q9Y2Z9 468 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 PTPRDP23468 1912 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 CASKO14936 926 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 AIREO43918 545 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 HOXD9P28356 352 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-208ENST00000430669 ARCN1P48444 511 aaKnown RBP11.13□□□□□ -0.63
PTCH1-208ENST00000430669 ARFIP1P53367 373 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 RAB25P57735 213 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 RNF130Q86XS8 419 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 HUS1BQ8NHY5 278 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 PREBQ9HCU5 417 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 HCN3Q9P1Z3 774 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 SERTAD3Q9UJW9 196 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms