RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 PKP4Q99569 1192 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 OLFM1Q99784 485 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 F5P12259 2224 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 HOXB6P17509 224 aaKnown RBP16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 IGFBP6P24592 240 aaPredicted RBP16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 FOLR3P41439 243 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 GDI2P50395 445 aaKnown RBP16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 RNF144AP50876 292 aaPredicted RBP16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 COX10Q12887 443 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 TIMM50Q3ZCQ8 353 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 ARMCX4Q5H9R4 360 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 ARHGAP12Q8IWW6 846 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 PARP8Q8N3A8 854 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 OR6N1Q8NGY5 312 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 SLC39A13Q96H72 371 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 SLC9B1P1A6NJY1 282 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 GJB3O75712 270 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 ALOX12P18054 663 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 SLC2A7Q6PXP3 512 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 FRRS1Q6ZNA5 592 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 TMEM135Q86UB9 458 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 CEP97Q8IW35 865 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 GALNT12Q8IXK2 581 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 MDGA1Q8NFP4 955 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 HIST1H2AAQ96QV6 131 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 OR52B2Q96RD2 323 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 EPYCQ99645 322 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 TAAR2Q9P1P5 351 aa16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 PTRH2Q9Y3E5 179 aaKnown RBP16.46■□□□□ 0.23
SMARCA4-203ENST00000429416 WWP2O00308 870 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 DLGAP3O95886 979 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 MAGP20916 626 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 BROXQ5VW32 411 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 ZNF57Q68EA5 555 aaPredicted RBP16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 NLGN4XQ8N0W4 816 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 DNAJB8Q8NHS0 232 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 GIPC3Q8TF64 312 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 TSEN15Q8WW01 171 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 TLCD1Q96CP7 247 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 C11orf16Q9NQ32 467 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 STARD5Q9NSY2 213 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 ARHGEF33A8MVX0 844 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 AKAP8O43823 692 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 PDYNP01213 254 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 PIK3CBP42338 1070 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 RHAGQ02094 409 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 PTGES3Q15185 160 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 BTBD16Q32M84 506 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 AP1ARQ63HQ0 302 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 OR52E4Q8NGH9 312 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 CIB1Q99828 191 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 ANKMY1Q9P2S6 941 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 MYH10P35580 1976 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 WASH4PA8MWX3 477 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 AHSA1O95433 338 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 SYNGR4O95473 234 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 PGRP06401 933 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 GNALP38405 381 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 WDR4P57081 412 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 CDK6Q00534 326 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.45■□□□□ 0.221e-7■■■■■ 34.5
SMARCA4-203ENST00000429416 PDZK1Q5T2W1 519 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 CLVS1Q8IUQ0 354 aaPredicted RBP16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 CHERPQ8IWX8 916 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 UBALD2Q8IYN6 164 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 NFKBIDQ8NI38 313 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 LRRC46Q96FV0 321 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 ZNF570Q96NI8 536 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 ZNF184Q99676 751 aaPredicted RBP16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 THAP10Q9P2Z0 257 aaPredicted RBP16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 HMGA1P17096 107 aaKnown RBP16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 POU6F2P78424 691 aaPredicted RBP16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 FLYWCH1Q4VC44 716 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 C11orf88Q6PI97 169 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 DNAJA3Q96EY1 480 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 CEP290O15078 2479 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 IQCMA0A1B0GVH7 501 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 ASNA1O43681 348 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 RENP00797 406 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 ANPEPP15144 967 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 TRIQKQ629K1 86 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 ABRAXAS1Q6UWZ7 409 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 KLHDC8AQ8IYD2 350 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 OR5L2Q8NGL0 311 aa16.45■□□□□ 0.22
SMARCA4-203ENST00000429416 PRSS51A0A1B0GVH4 220 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 CTSCP53634 463 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 TRIM71Q2Q1W2 868 aaKnown RBP16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 GPAT4Q86UL3 456 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 RAB43Q86YS6 212 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 ARL10Q8N8L6 244 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 DCUN1D5Q9BTE7 237 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 REEP4Q9H6H4 257 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 TPT1P8Q9HAU6 139 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 TMEM184CQ9NVA4 438 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 ENTPD2Q9Y5L3 495 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 DLG1Q12959 904 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 NOXRED1Q6NXP6 359 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 SLC6A18Q96N87 628 aa16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 GEMIN8Q9NWZ8 242 aaKnown RBP16.44■□□□□ 0.22
SMARCA4-203ENST00000429416 EPHA6Q9UF33 1036 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms