RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 DNAJB8Q8NHS0 232 aa16.06■□□□□ 0.16
TRIM39-209ENST00000428728 M1APQ8TC57 530 aa16.06■□□□□ 0.16
TRIM39-209ENST00000428728 NT5CQ8TCD5 201 aa16.06■□□□□ 0.16
TRIM39-209ENST00000428728 LRRC39Q96DD0 335 aa16.06■□□□□ 0.16
TRIM39-209ENST00000428728 EGFL8Q99944 293 aa16.06■□□□□ 0.16
TRIM39-209ENST00000428728 UTP23Q9BRU9 249 aaKnown RBP16.06■□□□□ 0.16
TRIM39-209ENST00000428728 SARGQ9BW04 601 aa16.06■□□□□ 0.16
TRIM39-209ENST00000428728 GRPEL1Q9HAV7 217 aa16.06■□□□□ 0.16
TRIM39-209ENST00000428728 MMP25Q9NPA2 562 aa16.06■□□□□ 0.16
TRIM39-209ENST00000428728 ZFP69BQ9UJL9 534 aa16.06■□□□□ 0.16
TRIM39-209ENST00000428728 CRYBG3Q68DQ2 2970 aa16.06■□□□□ 0.16
TRIM39-209ENST00000428728 GABRR3A8MPY1 467 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 FAM227AF5H4B4 570 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 SEC31AO94979 1220 aaKnown RBP16.05■□□□□ 0.16
TRIM39-209ENST00000428728 IL10P22301 178 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 SCTRP47872 440 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 SLC26A5P58743 744 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 TAS2R50P59544 299 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 RAB8AP61006 207 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 OC90Q02509 493 aaPredicted RBP16.05■□□□□ 0.16
TRIM39-209ENST00000428728 MGAT5Q09328 741 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 PDIA2Q13087 525 aaKnown RBP16.05■□□□□ 0.16
TRIM39-209ENST00000428728 OR1C1Q15619 314 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 ABHD13Q7L211 337 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 STRA8Q7Z7C7 330 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 THOC6Q86W42 341 aaKnown RBP16.05■□□□□ 0.16
TRIM39-209ENST00000428728 ZC3HC1Q86WB0 502 aaKnown RBP16.05■□□□□ 0.16
TRIM39-209ENST00000428728 CYP4X1Q8N118 509 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 KIF2BQ8N4N8 673 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 SLC5A8Q8N695 610 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 ANKRD53Q8N9V6 530 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 MDS2Q8NDY4 140 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 FBXO36Q8NEA4 188 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 UTP15Q8TED0 518 aaKnown RBP16.05■□□□□ 0.16
TRIM39-209ENST00000428728 RELTQ969Z4 430 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 RUNDC3BQ96NL0 473 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 TSPAN10Q9H1Z9 355 aaPredicted RBP16.05■□□□□ 0.16
TRIM39-209ENST00000428728 PELI2Q9HAT8 420 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 COPG2Q9UBF2 871 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 SUCOQ9UBS9 1254 aaKnown RBP16.05■□□□□ 0.16
TRIM39-209ENST00000428728 SLC22A14Q9Y267 594 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 PCNX1Q96RV3 2341 aa16.05■□□□□ 0.16
TRIM39-209ENST00000428728 NCOA6Q14686 2063 aaPredicted RBP16.04■□□□□ 0.16
TRIM39-209ENST00000428728 C4orf51C9J302 202 aa16.04■□□□□ 0.16
TRIM39-209ENST00000428728 WISP2O76076 250 aa16.04■□□□□ 0.16
TRIM39-209ENST00000428728 AHRP35869 848 aa16.04■□□□□ 0.16
TRIM39-209ENST00000428728 CD96P40200 585 aa16.04■□□□□ 0.16
TRIM39-209ENST00000428728 RBBP5Q15291 538 aaKnown RBP16.04■□□□□ 0.16
TRIM39-209ENST00000428728 CAPN12Q6ZSI9 719 aa16.04■□□□□ 0.16
TRIM39-209ENST00000428728 FRA10AC1Q70Z53 315 aa16.04■□□□□ 0.16
TRIM39-209ENST00000428728 MARVELD3Q96A59 401 aa16.04■□□□□ 0.16
TRIM39-209ENST00000428728 PDLIM5Q96HC4 596 aaKnown RBP16.04■□□□□ 0.16
TRIM39-209ENST00000428728 PTCHD1Q96NR3 888 aa16.04■□□□□ 0.16
TRIM39-209ENST00000428728 AIF1LQ9BQI0 150 aa16.04■□□□□ 0.16
TRIM39-209ENST00000428728 UNKQ9C0B0 810 aaKnown RBP16.04■□□□□ 0.16
TRIM39-209ENST00000428728 RHBGQ9H310 441 aa16.04■□□□□ 0.16
TRIM39-209ENST00000428728 ITPR2Q14571 2701 aa16.03■□□□□ 0.16
TRIM39-209ENST00000428728 CCL21O00585 134 aa16.03■□□□□ 0.16
TRIM39-209ENST00000428728 NDC80O14777 642 aa16.03■□□□□ 0.16
TRIM39-209ENST00000428728 MAOAP21397 527 aa16.03■□□□□ 0.16
TRIM39-209ENST00000428728 EEF1DP29692 281 aaKnown RBP16.03■□□□□ 0.16
TRIM39-209ENST00000428728 CA7P43166 264 aa16.03■□□□□ 0.16
TRIM39-209ENST00000428728 TAS2R39P59534 338 aa16.03■□□□□ 0.16
TRIM39-209ENST00000428728 GNG11P61952 73 aa16.03■□□□□ 0.16
TRIM39-209ENST00000428728 BTG2P78543 158 aa16.03■□□□□ 0.16
TRIM39-209ENST00000428728 RBPJQ06330 500 aa16.03■□□□□ 0.16
TRIM39-209ENST00000428728 TSNQ15631 228 aaKnown RBP16.03■□□□□ 0.16
TRIM39-209ENST00000428728 C18orf21Q32NC0 220 aaPredicted RBP16.03■□□□□ 0.16
TRIM39-209ENST00000428728 TOR1AIP1Q5JTV8 583 aa16.03■□□□□ 0.16
TRIM39-209ENST00000428728 SPINK14Q6IE38 97 aa16.03■□□□□ 0.16
TRIM39-209ENST00000428728 NIPAL1Q6NVV3 410 aa16.03■□□□□ 0.16
TRIM39-209ENST00000428728 NXPE4Q6UWF7 544 aa16.03■□□□□ 0.16
TRIM39-209ENST00000428728 CREG2Q8IUH2 290 aa16.03■□□□□ 0.16
TRIM39-209ENST00000428728 NKAPQ8N5F7 415 aaKnown RBP16.03■□□□□ 0.16
TRIM39-209ENST00000428728 ITLN2Q8WWU7 325 aaPredicted RBP16.03■□□□□ 0.16
TRIM39-209ENST00000428728 CCDC120Q96HB5 630 aa16.03■□□□□ 0.16
TRIM39-209ENST00000428728 NAPGQ99747 312 aaPredicted RBP16.03■□□□□ 0.16
TRIM39-209ENST00000428728 SLC6A16Q9GZN6 736 aa16.03■□□□□ 0.16
TRIM39-209ENST00000428728 KLHL31Q9H511 634 aa16.03■□□□□ 0.16
TRIM39-209ENST00000428728 CDCP1Q9H5V8 836 aa16.03■□□□□ 0.16
TRIM39-209ENST00000428728 KCNE2Q9Y6J6 123 aa16.03■□□□□ 0.16
TRIM39-209ENST00000428728 CACNA1CQ13936 2221 aa16.03■□□□□ 0.16
TRIM39-209ENST00000428728 CENPEQ02224 2701 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 URADA6NGE7 173 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 EFCAB8A8MWE9 144 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 PSMD12O00232 456 aaPredicted RBP16.02■□□□□ 0.16
TRIM39-209ENST00000428728 HNRNPRO43390 633 aaKnown RBP16.02■□□□□ 0.16
TRIM39-209ENST00000428728 PRMT3O60678 531 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 SLC19A2O60779 497 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 PIAS1O75925 651 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 WDR47O94967 919 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 RNH1P13489 461 aaKnown RBP16.02■□□□□ 0.16
TRIM39-209ENST00000428728 CD46P15529 392 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 HYAL2Q12891 473 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 FRG1Q14331 258 aaKnown RBP16.02■□□□□ 0.16
TRIM39-209ENST00000428728 QSOX2Q6ZRP7 698 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 GALNTL5Q7Z4T8 443 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 ADAMTSL2Q86TH1 951 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 CEP97Q8IW35 865 aa16.02■□□□□ 0.16
TRIM39-209ENST00000428728 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms