RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 FCRLBQ6BAA4 426 aa17.34■□□□□ 0.37
PSPC1-202ENST00000427943 FAM180AQ6UWF9 173 aa17.34■□□□□ 0.37
PSPC1-202ENST00000427943 UTP15Q8TED0 518 aaKnown RBP17.34■□□□□ 0.37
PSPC1-202ENST00000427943 RHBDF1Q96CC6 855 aa17.34■□□□□ 0.37
PSPC1-202ENST00000427943 DERL2Q9GZP9 239 aa17.34■□□□□ 0.37
PSPC1-202ENST00000427943 ERRFI1Q9UJM3 462 aaPredicted RBP17.34■□□□□ 0.37
PSPC1-202ENST00000427943 UTP11Q9Y3A2 253 aaKnown RBP17.34■□□□□ 0.37
PSPC1-202ENST00000427943 A1L4Q6 167 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 FAM159BA6NKW6 160 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 C4orf51C9J302 202 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 CHST10O43529 356 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 WDPCPO95876 746 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 CCDC166P0CW27 439 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 GMPRP36959 345 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 GP5P40197 560 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 SLC6A12P48065 614 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 HNMTP50135 292 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 AP2B1P63010 937 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 HYAL2Q12891 473 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 TGFBIQ15582 683 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 TRADDQ15628 312 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 SFT2D3Q587I9 215 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 TOR1AIP1Q5JTV8 583 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 ABHD17BQ5VST6 288 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 PLAG1Q6DJT9 500 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 PAPD4Q6PIY7 484 aaKnown RBP17.33■□□□□ 0.36
PSPC1-202ENST00000427943 C3orf62Q6ZUJ4 267 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 ABHD13Q7L211 337 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 CTAGE3PQ8IX95 158 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 ST6GALNAC3Q8NDV1 305 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 FBXO25Q8TCJ0 367 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 FAR1Q8WVX9 515 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 HAS2Q92819 552 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 TSPAN17Q96FV3 270 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 OR1F2PQ96R84 312 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 GPR22Q99680 433 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 CPNE1Q99829 537 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 TMEM79Q9BSE2 394 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 SLC6A16Q9GZN6 736 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.33■□□□□ 0.36
PSPC1-202ENST00000427943 RAB17Q9H0T7 212 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 KLHL31Q9H511 634 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 WWOXQ9NZC7 414 aa17.33■□□□□ 0.36
PSPC1-202ENST00000427943 PLEKHB1Q9UF11 243 aaPredicted RBP17.33■□□□□ 0.36
PSPC1-202ENST00000427943 CROCCQ5TZA2 2017 aa17.32■□□□□ 0.36
PSPC1-202ENST00000427943 TRAV17A0A0B4J275 112 aa17.32■□□□□ 0.36
PSPC1-202ENST00000427943 A8MUI8 341 aa17.32■□□□□ 0.36
PSPC1-202ENST00000427943 FAM155BO75949 473 aa17.32■□□□□ 0.36
PSPC1-202ENST00000427943 C1QAP02745 245 aa17.32■□□□□ 0.36
PSPC1-202ENST00000427943 FHP07954 510 aa17.32■□□□□ 0.36
PSPC1-202ENST00000427943 STMN1P16949 149 aa17.32■□□□□ 0.36
PSPC1-202ENST00000427943 ST13P50502 369 aaKnown RBP17.32■□□□□ 0.36
PSPC1-202ENST00000427943 SKP1P63208 163 aa17.32■□□□□ 0.36
PSPC1-202ENST00000427943 SLBPQ14493 270 aaKnown RBP eCLIP17.32■□□□□ 0.36
PSPC1-202ENST00000427943 NSDHLQ15738 373 aa17.32■□□□□ 0.36
PSPC1-202ENST00000427943 RPUSD3Q6P087 351 aaKnown RBP17.32■□□□□ 0.36
PSPC1-202ENST00000427943 ZDHHC24Q6UX98 284 aa17.32■□□□□ 0.36
PSPC1-202ENST00000427943 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.32■□□□□ 0.36
PSPC1-202ENST00000427943 TRPV3Q8NET8 790 aa17.32■□□□□ 0.36
PSPC1-202ENST00000427943 EXT2Q93063 718 aa17.32■□□□□ 0.36
PSPC1-202ENST00000427943 TBC1D20Q96BZ9 403 aa17.32■□□□□ 0.36
PSPC1-202ENST00000427943 AICDAQ9GZX7 198 aa17.32■□□□□ 0.36
PSPC1-202ENST00000427943 OR5H15A6NDH6 313 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 MAGEB17A8MXT2 336 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 B4GALT2O60909 372 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 C1GALT1C1LP0DN25 315 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 CD1DP15813 335 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 GNAZP19086 355 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 IL10P22301 178 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 OR4D2P58180 307 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 ILF2Q12905 390 aaKnown RBP17.31■□□□□ 0.36
PSPC1-202ENST00000427943 EFTUD2Q15029 972 aaKnown RBP eCLIP17.31■□□□□ 0.36
PSPC1-202ENST00000427943 OR4D1Q15615 310 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 KBTBD12Q3ZCT8 623 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 SLCO4C1Q6ZQN7 724 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 GPSM1Q86YR5 675 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 KLHDC8AQ8IYD2 350 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 PPM1NQ8N819 430 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 PLPP5Q8NEB5 264 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 CREB3L4Q8TEY5 395 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 ESAMQ96AP7 390 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 TAAR6Q96RI8 345 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 RNF32Q9H0A6 362 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 RHBGQ9H310 441 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 KCNK13Q9HB14 408 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 OLAHQ9NV23 265 aa17.31■□□□□ 0.36
PSPC1-202ENST00000427943 DIDO1Q9BTC0 2240 aaKnown RBP17.31■□□□□ 0.36
PSPC1-202ENST00000427943 POLEQ07864 2286 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 A0A0G2JN53 185 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 URADA6NGE7 173 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 TAPBPO15533 448 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 LDLRP01130 860 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 GSTA2P09210 222 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 EDN3P14138 238 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 JAK1P23458 1154 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 HSPA7P48741 367 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 BTG2P78543 158 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 CAV1Q03135 178 aa17.3■□□□□ 0.36
PSPC1-202ENST00000427943 SRSF11Q05519 484 aaKnown RBP17.3■□□□□ 0.36
PSPC1-202ENST00000427943 ACTN3Q08043 901 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms