RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 BMPR1AP36894 532 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 CCR2P41597 374 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 CLCN4P51793 760 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 SLC16A1P53985 500 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 COPZ1P61923 177 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 IFITM3Q01628 133 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 ARMCX4Q5H9R4 360 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 AGTRAPQ6RW13 159 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 NCCRP1Q6ZVX7 275 aaPredicted RBP12.88□□□□□ -0.35
USP42-203ENST00000426246 CHST9Q7L1S5 443 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 KIAA1522Q9P206 1035 aaPredicted RBP12.88□□□□□ -0.35
USP42-203ENST00000426246 CLEC4AQ9UMR7 237 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 CH25HO95992 272 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 TAS2R50P59544 299 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 TSTQ16762 297 aaKnown RBP12.88□□□□□ -0.35
USP42-203ENST00000426246 GHDCQ8N2G8 530 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 MRPL43Q8N983 215 aaKnown RBP12.88□□□□□ -0.35
USP42-203ENST00000426246 SPPL3Q8TCT6 385 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 COL26A1Q96A83 441 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 PRR14Q9BWN1 585 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 TMEM184CQ9NVA4 438 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 MS4A12Q9NXJ0 267 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 ASF1AQ9Y294 204 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 TMEM98Q9Y2Y6 226 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 CTDSP2O14595 271 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 ANKRD28O15084 1053 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 YY2O15391 372 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 SEC14L2O76054 403 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 WISP3O95389 354 aaPredicted RBP12.87□□□□□ -0.35
USP42-203ENST00000426246 LATS1O95835 1130 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 PORP16435 677 aaPredicted RBP12.87□□□□□ -0.35
USP42-203ENST00000426246 GRIN2CQ14957 1233 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 EXOC3L2Q2M3D2 409 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 INAVAQ3KP66 663 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 RNASE12Q5GAN4 147 aaKnown RBP12.87□□□□□ -0.35
USP42-203ENST00000426246 RAET1GQ6H3X3 334 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 PSRC1Q6PGN9 363 aaPredicted RBP12.87□□□□□ -0.35
USP42-203ENST00000426246 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.87□□□□□ -0.35
USP42-203ENST00000426246 IQCF1Q8N6M8 205 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 TERB1Q8NA31 727 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 PHOSPHO2Q8TCD6 241 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 AP2M1Q96CW1 435 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 SAMD11Q96NU1 681 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 SLC35A5Q9BS91 424 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 CLMPQ9H6B4 373 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 INIPQ9NRY2 104 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 SLC25A13Q9UJS0 675 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 OR51B4Q9Y5P0 310 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 GABRR3A8MPY1 467 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 TTC34A8MYJ7 566 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 WASH3PC4AMC7 463 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 KRT8P05787 483 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 C8AP07357 584 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 MAPK1P28482 360 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 HLA-FP30511 346 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 DNAJA1P31689 397 aaKnown RBP12.87□□□□□ -0.35
USP42-203ENST00000426246 ABHD18Q0P651 414 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 SPANXN2Q5MJ10 180 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 CLEC12AQ5QGZ9 265 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 SVOPLQ8N434 492 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 NECTIN4Q96NY8 510 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 ZNF347Q96SE7 839 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 NIPSNAP1Q9BPW8 284 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 NDEL1Q9GZM8 345 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 MUC13Q9H3R2 512 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 RPS6KA6Q9UK32 745 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 GSAPA4D1B5 854 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 LINC01553A4QN01 128 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 ANTXRLA6NF34 631 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 C5orf67F2Z3F1 127 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 LOC110117498-PIK3R3F6TDL0 507 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 PCDH17O14917 1159 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 PRAMEF4O60810 478 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 TSC22D2O75157 780 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 UGT2B11O75310 529 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 LEFTY1O75610 366 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 ATP1B2P14415 290 aaPredicted RBP12.87□□□□□ -0.35
USP42-203ENST00000426246 MLLT1Q03111 559 aaPredicted RBP12.87□□□□□ -0.35
USP42-203ENST00000426246 SLBPQ14493 270 aaKnown RBP eCLIP12.87□□□□□ -0.35
USP42-203ENST00000426246 KRT33BQ14525 404 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 PRAMEF9Q5VWM5 478 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 KIAA1614Q5VZ46 1190 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 TCAIMQ8N3R3 496 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 HUS1BQ8NHY5 278 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 JPH3Q8WXH2 748 aaPredicted RBP12.87□□□□□ -0.35
USP42-203ENST00000426246 ALG14Q96F25 216 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 ALPK1Q96QP1 1244 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 CENPOQ9BU64 300 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 P2RY12Q9H244 342 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 ZDHHC3Q9NYG2 299 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 TMEFF2Q9UIK5 374 aaPredicted RBP12.87□□□□□ -0.35
USP42-203ENST00000426246 ENPP5Q9UJA9 477 aa12.87□□□□□ -0.35
USP42-203ENST00000426246 LRRTM2O43300 516 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 CCNDBP1O95273 360 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 PRR35P0CG20 571 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 SYN1P17600 705 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 SOX3P41225 446 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 SLC7A9P82251 487 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 UGT8Q16880 541 aa12.86□□□□□ -0.35
USP42-203ENST00000426246 DUOXA1Q1HG43 343 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms